Evidence map›Paper›PMID 24837675›Full record

ArticleMolecular cell2014

CtIP maintains stability at common fragile sites and inverted repeats by end resection-independent endonuclease activity.

Hailong Wang, Yongjiang Li, Lan N Truong, Linda Z Shi, Patty Yi-Hwa Hwang, Jing He, Johnny Do, Michael Jeffrey Cho, Hongzhi Li, Alejandro Negrete and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed
13.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed, 136 citations in OpenAlex.

  1. Article
  2. Review
  3. ATM priming and end resection-coupled phosphorylation of MRE11 is important for fork protection and replication restart.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Homologous recombination within repetitive DNA.Current opinion in genetics & development · 2021
    Review
  14. DNA damage-induced phosphorylation of CtIP at a conserved ATM/ATR site T855 promotes lymphomagenesis in mice.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  15. Article
  16. Article
  17. The repair geneOncology reviews · 2021
    Article
  18. Article
  19. Article
  20. Article

32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 1 country.

Hailong WangDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Yongjiang LiDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Lan N TruongDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Linda Z ShiThe Institute of Engineering in Medicine, University of California at San Diego, La Jolla, CA 92093, USA.
Patty Yi-Hwa HwangDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Jing HeDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Johnny DoDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Michael Jeffrey ChoDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Hongzhi LiDepartment of Molecular Medicine, Beckman Research Institute, City of Hope, Duarte, CA 91010, USA.
Alejandro NegreteBiotechnology Core Laboratory, National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK), National Institutes of Health (NIH), Bethesda, MD 20892, USA.
Joseph ShiloachBiotechnology Core Laboratory, National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK), National Institutes of Health (NIH), Bethesda, MD 20892, USA.
Michael W BernsThe Institute of Engineering in Medicine, University of California at San Diego, La Jolla, CA 92093, USA; Department of Biomedical Engineering, Beckman Laser Institute, University of California at Irvine, Irvine, CA 92612, USA.
Binghui ShenDepartment of Radiation Biology, Beckman Research Institute, City of Hope, Duarte, CA 91010, USA.
Longchuan ChenDepartment of Pathology, Veterans Affairs Medical Center, Long Beach, CA 90822, USA.
Xiaohua WuDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA. Electronic address: xiaohwu@scripps.edu.
Scripps Research Institute · USCity of Hope · USNational Institutes of Health · USBeckman Laser Institute and Medical Clinic · USLong Beach Medical Center · USUniversity of California San Diego · US

Funding

Function Analysis of FEN-1 Nuclease in Genome StabilityR01CA073764 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI BINGHUI SHEN · 2002 to 2026
$7.9M
Production and purification of biological compoundsZICDK015500 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI SHILOACH, JOSEPH · 2009 to 2022
$7.2M
Role of the Mre11/Rad50/Nbs1 complex in DNA damage response pathwaysR01CA102361 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI WU, XIAOHUA · 2003 to 2012
$4.1M
Investigating DNA polymerase O in replication stress and cancer therapyR01CA294646 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI Xiaohua Wu · 2024 to 2026
$3.0M
S-phase checkpoint and rereplication in mammalian cellsR01GM080677 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI WU, XIAOHUA · 2010 to 2018
$2.9M
Role of BRCA1 and its association protein CtlP in DNA double-strand break repairR01CA140972 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI WU, XIAOHUA · 2010 to 2014
$2.2M
Large-scale production and purification of biological compoundsZIBDK015500 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI SHILOACH, JOSEPH · 2015 to 2016
$1.2M
NCI NIH HHS CA102361NCI NIH HHS CA102361-07S1NCI NIH HHS CA140972NCI NIH HHS CA140972-03S1NCI NIH HHS R01 CA073764NCI NIH HHS R01CA073764NCI NIH HHS R01 CA102361NCI NIH HHS R01 CA140972NCI NIH HHS R01 CA294646NIGMS NIH HHS GM080677NIGMS NIH HHS R01 GM080677
6 · The paper itself

Abstract

Chromosomal rearrangements often occur at genomic loci with DNA secondary structures, such as common fragile sites (CFSs) and palindromic repeats. We developed assays in mammalian cells that revealed CFS-derived AT-rich sequences and inverted Alu repeats (Alu-IRs) are mitotic recombination hotspots, requiring the repair functions of carboxy-terminal binding protein (CtBP)-interacting protein (CtIP) and the Mre11/Rad50/Nbs1 complex (MRN). We also identified an endonuclease activity of CtIP that is dispensable for end resection and homologous recombination (HR) at I-SceI-generated "clean" double-strand breaks (DSBs) but is required for repair of DSBs occurring at CFS-derived AT-rich sequences. In addition, CtIP nuclease-defective mutants are impaired in Alu-IRs-induced mitotic recombination. These studies suggest that an end resection-independent CtIP function is important for processing DSB ends with secondary structures to promote HR. Furthermore, our studies uncover an important role of MRN, CtIP, and their associated nuclease activities in protecting CFSs in mammalian cells.

Indexed as

DNA Breaks, Double-StrandedAcid Anhydride HydrolasesAlu ElementsBase CompositionCarrier ProteinsCell Cycle ProteinsCell LineChromosome Fragile SitesDNA-Binding ProteinsDNA RepairDNA Repair EnzymesEndodeoxyribonucleasesEndonucleasesHomologous RecombinationHumansInverted Repeat SequencesAcid Anhydride HydrolasesCarrier ProteinsCell Cycle ProteinsDNA-Binding ProteinsDNA Repair EnzymesEndodeoxyribonucleasesEndonucleasesMRE11 Homologue ProteinMRE11 protein, humanNBN protein, humanNuclear ProteinsRAD50 protein, humanRBBP8 protein, human

Identifiers

PMID24837675
PMCPMC4105207
OpenAlexW2144609528

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.