Evidence map›Paper›PMID 24837192›Full record

ArticleNature structural & molecular biology2014

Core structure of the U6 small nuclear ribonucleoprotein at 1.7-Å resolution.

Eric J Montemayor, Elizabeth C Curran, Hong Hong Liao, Kristie L Andrews, Christine N Treba, Samuel E Butcher, David A Brow

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 76 citations in OpenAlex.

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  5. Review
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  7. Control of 3' splice site selection by the yeast splicing factor Fyv6.bioRxiv : the preprint server for biology · 2024
    Article
  8. Structure of the human 20S U5 snRNP.Nature structural & molecular biology · 2024
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Eric J Montemayor1] Department of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA. [2] Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Elizabeth C Curran1] Department of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA. [2].
Hong Hong LiaoDepartment of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Kristie L Andrews1] Department of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA. [2].
Christine N TrebaDepartment of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Samuel E ButcherDepartment of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.
David A BrowDepartment of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.
University of Wisconsin–Madison · US

Funding

Structure and Function of U6 Spliceosomal RNAR01GM065166 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BROW, DAVID A, BUTCHER, SAMUEL E · 2002 to 2016
$3.5M
NIGMS NIH HHS GM065166NIGMS NIH HHS R01 GM065166
6 · The paper itself

Abstract

The spliceosome is a dynamic assembly of five small nuclear ribonucleoproteins (snRNPs) that removes introns from eukaryotic pre-mRNA. U6, the most conserved of the spliceosomal small nuclear RNAs (snRNAs), participates directly in catalysis. Here, we report the crystal structure of the Saccharomyces cerevisiae U6 snRNP core containing most of the U6 snRNA and all four RRM domains of the Prp24 protein. It reveals a unique interlocked RNP architecture that sequesters the 5' splice site-binding bases of U6 snRNA. RRMs 1, 2 and 4 of Prp24 form an electropositive groove that binds double-stranded RNA and may nucleate annealing of U4 and U6 snRNAs. Substitutions in Prp24 that suppress a mutation in U6 localize to direct RNA-protein contacts. Our results provide the most comprehensive view to date of a multi-RRM protein bound to RNA and reveal striking coevolution of protein and RNA structure.

Indexed as

Binding SitesCrystallography, X-RayEvolution, MolecularModels, MolecularProtein Structure, TertiaryRibonucleoproteins, Small NuclearRibonucleoprotein, U4-U6 Small NuclearRNA, Small NuclearSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsPrp24 protein, S cerevisiaeRibonucleoproteins, Small NuclearRibonucleoprotein, U4-U6 Small NuclearRNA, Small NuclearSaccharomyces cerevisiae ProteinsU6 small nuclear RNA

Identifiers

PMID24837192
PMCPMC4141773
OpenAlexW2029751805

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.