Evidence map›Paper›PMID 24835466›Full record

ArticleDevelopmental cell2014

GATA6 levels modulate primitive endoderm cell fate choice and timing in the mouse blastocyst.

Nadine Schrode, Néstor Saiz, Stefano Di Talia, Anna-Katerina Hadjantonakis

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 131 papers.

0numbers the graph read from it
0cells of the map it votes in
131citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

131 citing papers in PubMed, 253 citations in OpenAlex.

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71 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Nadine SchrodeDevelopmental Biology Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Néstor SaizDevelopmental Biology Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Stefano Di TaliaDepartment of Cell Biology, Duke University Medical Center, Durham, NC 27710, USA.
Anna-Katerina HadjantonakisDevelopmental Biology Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA. Electronic address: hadj@mskcc.org.
Memorial Sloan Kettering Cancer Center · USDuke University Hospital · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Morphogenesis of the paraxial mesoderm in miceR01HD052115 · NICHD · SLOAN-KETTERING INST CAN RESEARCH · PI HADJANTONAKIS, ANNA-KATERINA · 2006 to 2015
$4.1M
Morphogenesis of mammalian gut endodermR01DK084391 · NIDDK · SLOAN-KETTERING INST CAN RESEARCH · PI HADJANTONAKIS, ANNA-KATERINA · 2009 to 2018
$4.1M
Time-keeping Mechanisms in Drosophila Embryonic DevelopmentR00HD074670 · NICHD · DUKE UNIVERSITY · PI DI TALIA, STEFANO · 2014 to 2016
$705k
Time-keeping mechanisms in Drosophila embryonic developmentK99HD074670 · NICHD · PRINCETON UNIVERSITY · PI DI TALIA, STEFANO · 2013 to 2013
$97k
NCI NIH HHS P30 CA008748NICHD NIH HHS K99 HD074670NICHD NIH HHS K99-HD074670NICHD NIH HHS R00 HD074670NICHD NIH HHS R01 HD052115NICHD NIH HHS R01-HD052115NIDDK NIH HHS R01 DK084391NIDDK NIH HHS R01-DK084391
6 · The paper itself

Abstract

Cells of the inner cell mass (ICM) of the mouse blastocyst differentiate into the pluripotent epiblast or the primitive endoderm (PrE), marked by the transcription factors NANOG and GATA6, respectively. To investigate the mechanistic regulation of this process, we applied an unbiased, quantitative, single-cell-resolution image analysis pipeline to analyze embryos lacking or exhibiting reduced levels of GATA6. We find that Gata6 mutants exhibit a complete absence of PrE and demonstrate that GATA6 levels regulate the timing and speed of lineage commitment within the ICM. Furthermore, we show that GATA6 is necessary for PrE specification by FGF signaling and propose a model where interactions between NANOG, GATA6, and the FGF/ERK pathway determine ICM cell fate. This study provides a framework for quantitative analyses of mammalian embryos and establishes GATA6 as a nodal point in the gene regulatory network driving ICM lineage specification.

Indexed as

AnimalsBenzamidesBlastocyst Inner Cell MassCell DifferentiationCell LineageDiphenylamineEmbryo Culture TechniquesEmbryo, MammalianEndodermExtracellular Signal-Regulated MAP KinasesFibroblast Growth Factor 4GATA6 Transcription FactorGene Expression Regulation, DevelopmentalHMGB ProteinsHomeodomain ProteinsMAP Kinase Signaling SystemBenzamidesDiphenylamineExtracellular Signal-Regulated MAP KinasesFgf4 protein, mouseFibroblast Growth Factor 4Gata6 protein, mouseGATA6 Transcription FactorHMGB ProteinsHomeodomain ProteinsmirdametinibNanog Homeobox ProteinNanog protein, mouseSox17 protein, mouseSOXF Transcription Factors

Identifiers

PMID24835466
PMCPMC4103658
OpenAlexW2024759663

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.