Evidence map›Paper›PMID 24835018›Full record

ArticleBiochimica et biophysica acta2015

Correlating lipid bilayer fluidity with sensitivity and resolution of polytopic membrane protein spectra by solid-state NMR spectroscopy.

James R Banigan, Anindita Gayen, Nathaniel J Traaseth

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Spectroscopic signatures of bilayer ordering in native biological membranes.Biochimica et biophysica acta. Biomembranes · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Afterglow Solid-State NMR Spectroscopy.Methods in molecular biology (Clifton, N.J.) · 2018
    Article
  10. Article
  11. Article
  12. MASBiophysical journal · 2016
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

3 authors.

James R BaniganDepartment of Chemistry, New York University, New York, NY 10003.
Anindita GayenDepartment of Chemistry, New York University, New York, NY 10003.
Nathaniel J TraasethDepartment of Chemistry, New York University, New York, NY 10003. Electronic address: traaseth@nyu.edu.

Funding

Mechanisms of Allostery and Molecular Recognition in the Small Multidrug Resistance FamilyR01AI108889 · NIAID · NEW YORK UNIVERSITY · PI Nathaniel J. Traaseth · 2014 to 2026
$5.4M
Structural Topology of a Small Multidrug Resistant Efflux PumpK22AI083745 · NIAID · NEW YORK UNIVERSITY · PI TRAASETH, NATHANIEL J. · 2011 to 2012
$267k
NIAID NIH HHS K22 AI083745NIAID NIH HHS K22AI083745NIAID NIH HHS R01 AI108889
6 · The paper itself

Abstract

Solid-state NMR spectroscopy has emerged as an excellent tool to study the structure and dynamics of membrane proteins under native-like conditions in lipid bilayers. One of the key considerations in experimental design is the uniaxial rotational diffusion of the protein that can affect the NMR spectral observables. In this regard, temperature plays a fundamental role in modulating the phase properties of the lipids, which directly influences the rotational diffusion rate of the protein in the bilayer. In fact, it is well established that below the main phase transition temperature of the lipid bilayer the protein's motion is significantly slowed while above this critical temperature the rate is increased. In this article, we carried out a systematic comparison of the signal intensity and spectral resolution as a function of temperature using magic-angle-spinning (MAS) solid-state NMR spectroscopy. These observables were directly correlated with the relative fluidity of the lipid bilayer as inferred from differential scanning calorimetry (DSC). We applied our hybrid biophysical approach to two polytopic membrane proteins from the small multidrug resistance family (EmrE and SugE) reconstituted into model membrane lipid bilayers (DMPC-14:0 and DPPC-16:0). From these experiments, we conclude that the rotational diffusion giving optimal spectral resolution occurs at a bilayer fluidity of ~5%, which corresponds to the percentage of lipids in the fluid or liquid-crystalline fraction. At the temperature corresponding to this critical value of fluidity, there is sufficient mobility to reduce inhomogeneous line broadening that occurs at lower temperatures. A greater extent of fluidity leads to faster uniaxial rotational diffusion and a sigmoidal-type reduction in the NMR signal intensity, which stems from intermediate-exchange dynamics where the motion has a similar frequency as the NMR observables (i.e., dipolar couplings and chemical shift anisotropy). These experiments provide insight into the optimal temperature range and corresponding bilayer fluidity to study membrane proteins by solid-state NMR spectroscopy.

Indexed as

Membrane FluidityAmino Acid SequenceCalorimetry, Differential ScanningLipid BilayersMagnetic Resonance SpectroscopyMembrane ProteinsMolecular Sequence DataLipid BilayersMembrane ProteinsBilayer fluidityDifferential scanning calorimetryEmrEMembrane proteinsSmall multidrug resistance familySolid-state NMR

Identifiers

PMID24835018
PMCPMC4438312

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.