Evidence map›Paper›PMID 24830960›Full record

ArticleJournal of human genetics2014

Genetic polymorphism 609C>T in NAD(P)H:quinone oxidoreductase 1 enhances the risk of proximal colon cancer.

Jolien J M Freriksen, Jody Salomon, Hennie M J Roelofs, Rene H M Te Morsche, Jos W J van der Stappen, Polat Dura, Ben J M Witteman, Martin Lacko, Wilbert H M Peters

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Article in Journal of human genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Jolien J M FreriksenDepartment of Gastroenterology, Radboud University Nijmegen Medical Center, Nijmegen, The Netherlands.
Jody SalomonDepartment of Gastroenterology, Radboud University Nijmegen Medical Center, Nijmegen, The Netherlands.
Hennie M J RoelofsDepartment of Gastroenterology, Radboud University Nijmegen Medical Center, Nijmegen, The Netherlands.
Rene H M Te MorscheDepartment of Gastroenterology, Radboud University Nijmegen Medical Center, Nijmegen, The Netherlands.
Jos W J van der StappenDepartment of Clinical Chemistry, Canisius-Wilhelmina Ziekenhuis, Nijmegen, The Netherlands.
Polat DuraDepartment of Gastroenterology, Radboud University Nijmegen Medical Center, Nijmegen, The Netherlands.
Ben J M WittemanDepartment of Gastroenterology, Hospital Gelderse Vallei, Ede, The Netherlands.
Martin LackoDepartment of Otorhinolaryngology, Head and Neck Surgery, Maastricht University Medical Center, Maastricht, The Netherlands.
Wilbert H M PetersDepartment of Gastroenterology, Radboud University Nijmegen Medical Center, Nijmegen, The Netherlands.
Radboud University Nijmegen · NLCanisius-Wilhelmina Ziekenhuis · NLMaastricht University · NLZiekenhuis Gelderse Vallei · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gastrointestinal (GI) cancer is responsible for the majority of deaths among all types of cancer. Lifestyle factors may not only be the main risk factor for GI cancer but reactive oxygen species (ROS) may also be involved. The single-nucleotide polymorphisms (SNPs) 609C>T (rs1800566) and 465C>T (rs1131341) in the NAD(P)H: quinone oxidoreductase 1 (NQO1) gene lead to a decline in NQO1 enzyme activity. NQO1 catalyzes the two-electron reduction of quinones to hydroquinones, thereby preventing the formation of ROS. Such polymorphisms in NQO1 may increase the risk of GI cancer. The aim of this study was to evaluate the influence of the SNPs rs1800566 and rs1131341 in the NQO1 gene on the risk of GI cancer in the Netherlands. Real-time polymerase chain reaction techniques were conducted to determine the NQO1 genotypes of 1457 patients with GI cancer and 1457 age- and gender-matched controls in a case-control study. Binary logistic regression analyses showed no statistically significant difference in genotype distributions between patients and controls: odds ratios (ORs) with 95% confidence interval (CI) for rs1800566 were 1.09 (0.93-1.28) and 1.17 (0.77-1.77) for the CT and TT genotypes, respectively. ORs for rs1131341 CT and TT genotypes were 1.21 (0.90-1.63) and 0.54 (0.05-5.94), respectively. For rs1800566, a significant association between the CT genotype and proximal colon cancer was detected (OR=1.60; 95% CI=1.09-2.35). The NQO1*2 T allele of SNP rs1800566 was found associated with an increased risk for proximal colorectal cancer, whereas SNP rs1131341 was rare in our Dutch population and was not associated with GI cancer.

Indexed as

Genetic Predisposition to DiseasePolymorphism, Single NucleotideAllelesCase-Control StudiesColonic NeoplasmsFemaleGenotypeHumansMaleNAD(P)H Dehydrogenase (Quinone)NetherlandsOdds RatioRiskNAD(P)H Dehydrogenase (Quinone)NQO1 protein, human

Identifiers

PMID24830960
OpenAlexW2059440028

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.