Evidence map›Paper›PMID 24829352›Full record

ArticleJournal of virology2014

Recovery of an HMWP/hmwBP (pUL48/pUL47) complex from virions of human cytomegalovirus: subunit interactions, oligomer composition, and deubiquitylase activity.

Jennifer A Tullman, Mary-Elizabeth Harmon, Michael Delannoy, Wade Gibson

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
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  4. Autophagy receptors as viral targets.Cellular & molecular biology letters · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jennifer A TullmanVirology Laboratories, Department of Pharmacology and Molecular Sciences, and The School of Medicine Microscopy Facility, The Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Mary-Elizabeth HarmonVirology Laboratories, Department of Pharmacology and Molecular Sciences, and The School of Medicine Microscopy Facility, The Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Michael DelannoyVirology Laboratories, Department of Pharmacology and Molecular Sciences, and The School of Medicine Microscopy Facility, The Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Wade GibsonVirology Laboratories, Department of Pharmacology and Molecular Sciences, and The School of Medicine Microscopy Facility, The Johns Hopkins University School of Medicine, Baltimore, Maryland, USA wgibson@bs.jhmi.edu.
Johns Hopkins Medicine · USJohns Hopkins University · US

Funding

TRAINING IN ANTICANCER DRUG DEVELOPMENTT32CA009243 · NCI · JOHNS HOPKINS UNIVERSITY · PI STIVERS, JAMES T. · 1985 to 2012
$6.2M
HERPESVIRUS PROTEIN SYNTHESIS &VIRION ASSEMBLYR01AI013718 · NIAID · JOHNS HOPKINS UNIVERSITY · PI GIBSON, D. WADE · 1985 to 2005
$2.1M
Cytomegalovirus Deubiquitinase pUL48: Identifying Substrate and InhibitorsR21AI082246 · NIAID · JOHNS HOPKINS UNIVERSITY · PI GIBSON, D WADE · 2009 to 2010
$651k
Herpesvirus Protein Synthesis And Virion AssemblyR56AI013718 · NIAID · JOHNS HOPKINS UNIVERSITY · PI GIBSON, D WADE · 2008 to 2008
$410k
PHARMACOLOGY TRAINING GRANTT32GM007626 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI AUGUST, J. THOMAS THOMAS · 1985 to 1998
–
NCI NIH HHS T32 CA009243NIAID NIH HHS AI082246NIAID NIH HHS AI13718NIAID NIH HHS R01 AI013718NIAID NIH HHS R21 AI082246NIAID NIH HHS R56 AI013718NIGMS NIH HHS T32 GM007626
6 · The paper itself

Abstract

unlabelledWe report that the human cytomegalovirus (HCMV) high-molecular-weight tegument protein (HMWP, pUL48; 253 kDa) and the HMWP-binding protein (hmwBP, pUL47; 110 kDa) can be recovered as a complex from virions disrupted by treatment with 50 mM Tris (pH 7.5), 0.5 M NaCl, 0.5% NP-40, and 10 mM dithiothreitol [DTT]. The subunit ratio of the complex approximates 1:1, with a shape and structure consistent with an elongated heterodimer. The HMWP/hmwBP complex was corroborated by reciprocal coimmunoprecipitation experiments using antipeptide antibodies and lysates from both infected cells and disrupted virus particles. An interaction of the amino end of pUL48 (amino acids [aa] 322 to 754) with the carboxyl end of pUL47 (aa 693 to 982) was identified by fragment coimmunoprecipitation experiments, and a head-to-tail self-interaction of hmwBP was also observed. The deubiquitylating activity of pUL48 is retained in the isolated complex, which cleaves K11, K48, and K63 ubiquitin isopeptide linkages. IMPORTANCE: Human cytomegalovirus (HCMV, or human herpesvirus 5 [HHV-5]) is a large DNA-containing virus that belongs to the betaherpesvirus subfamily and is a clinically important pathogen. Defining the constituent elements of its mature form, their organization within the particle, and the assembly process by which it is produced are fundamental to understanding the mechanisms of herpesvirus infection and developing drugs and vaccines against them. In this study, we report isolating a complex of two large proteins encoded by HCMV open reading frames (ORFs) UL47 and UL48 and identifying the binding domains responsible for their interaction with each other and of pUL47 with itself. Our calculations indicate that the complex is a rod-shaped heterodimer. Additionally, we determined that the ubiquitin-specific protease activity of the ORF UL48 protein was functional in the complex, cleaving K11-, K48-, and K63-linked ubiquitin dimers. This information builds on and extends our understanding of the HCMV tegument protein network that is required to interface the HCMV envelope and capsid.

Indexed as

Protein MultimerizationCell LineCytomegalovirusHumansImmunoprecipitationProtein BindingProtein Interaction Domains and MotifsProtein Interaction MappingProtein SubunitsUbiquitin-Specific ProteasesViral ProteinsVirionProtein SubunitsUbiquitin-Specific ProteasesUL47 protein, cytomegalovirusUL48 protein, human cytomegalovirusViral Proteins

Identifiers

PMID24829352
PMCPMC4135962
OpenAlexW2154979826

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.