Evidence map›Paper›PMID 24828915›Full record

ArticleChembiochem : a European journal of chemical biology2014

Fluorescent visualization of Src by using dasatinib-BODIPY.

Michael L Vetter, Zijuan Zhang, Shuai Liu, Jinhua Wang, HaeYeon Cho, Jianming Zhang, Wei Zhang, Nathanael S Gray, Priscilla L Yang

Abstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
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  3. Article
  4. Article
  5. Article
  6. Article
  7. Kinase-templated abiotic reaction.Chemical science · 2017
    Article
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  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Michael L VetterDepartment of Microbiology and Immunobiology, Harvard Medical School, 77 Avenue Louis Pasteur, Boston, MA 02115 (USA).
Zijuan Zhang
Shuai Liu
Jinhua Wang
HaeYeon Cho
Jianming Zhang
Wei Zhang
Nathanael S Gray
Priscilla L Yang
Harvard University · USUniversity of Massachusetts Boston · USDana-Farber Cancer Institute · US

Funding

Treatments for Nipah Virus InfectionU54AI057159 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WHELAN, SEAN PJ · 2003 to 2013
$113.7M
STRUCTURE-FUNCTION RELATIONSHIPS IN THE ALIMENTARY TRACTP30DK034854 · NIDDK · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WAYNE I LENCER · 1986 to 2026
$32.4M
U Mass Boston / DFHCC U54 Partnership (1 of 2)U54CA156732 · NCI · DANA-FARBER CANCER INST · PI WENDY Beth LONDON · 2010 to 2026
$25.6M
INFECTIOUS DISEASE AND BASIC MICROBIOLOGICAL MECHANISMST32AI007061 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI Marcia B Goldberg · 1985 to 2026
$12.1M
Validation of Src kinases as Anti-Dengue Viral TargetsR01AI076442 · NIAID · HARVARD MEDICAL SCHOOL · PI YANG, PRISCILLA LI-NING · 2008 to 2012
$2.1M
NCI NIH HHS U54 CA156732NIAID NIH HHS AI076442NIAID NIH HHS R01 AI076442NIAID NIH HHS T32 AI007061NIAID NIH HHS U54 AI057159NIDDK NIH HHS P30 DK034854
6 · The paper itself

Abstract

Many biological experiments are not compatible with the use of immunofluorescence, genetically encoded fluorescent tags, or FRET-based reporters. Conjugation of existing kinase inhibitors to cell-permeable fluorophores can provide a generalized approach to develop fluorescent probes of intracellular kinases. Here, we report the development of a small molecule probe of Src through conjugation of BODIPY to two well-established dual Src-Abl kinase inhibitors, dasatinib and saracatinib. We show that this approach is not successful for saracatinib but that dasatinib-BODIPY largely retains the biological activity of its parent compound and can be used to monitor the presence of Src kinase in individual cells by flow cytometry. It can also be used to track the localization of Src by fixed and live-cell fluorescence microscopy. This strategy could enable generation of additional kinase-specific probes useful in systems not amenable to genetic manipulation or could be used together with fluorescent proteins to enable a multiplexed assay readout.

Indexed as

FluorescenceAnimalsBenzodioxolesBoron CompoundsCell LineCell ProliferationCell SurvivalDasatinibDose-Response Relationship, DrugHumansMiceMicroscopy, FluorescenceMolecular ProbesMolecular StructureProtein Kinase InhibitorsPyrimidines4,4-difluoro-4-bora-3a,4a-diaza-s-indaceneBenzodioxolesBoron CompoundsDasatinibMolecular ProbesProtein Kinase InhibitorsPyrimidinesQuinazolinessaracatinibsrc-Family KinasesThiazolescell recognitionfluorescent probeskinase inhibitorsproteinssignal transduction

Identifiers

PMID24828915
PMCPMC4130483
OpenAlexW1986021534

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.