ArticleScientific reports2014
Analysis of horse genomes provides insight into the diversification and adaptive evolution of karyotype.
Article in Scientific reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
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Who cites it
27 citing papers in PubMed, 96 citations in OpenAlex.
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- Telomere-to-telomere Genome Assembly of Equus kiang (Tibetan wild donkey).Scientific data · 2026Article
- The genetic diversity and population structure of native horse breeds in Xinjiang, China.Frontiers in genetics · 2025Article
- The genome of Przewalski's horse (Equus ferus przewalskii).G3 (Bethesda, Md.) · 2024Article
- The genome of Przewalski's horse (bioRxiv : the preprint server for biology · 2024Article
- Review
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- The Innovative Informatics Approaches of High-Throughput Technologies in Livestock: Spearheading the Sustainability and Resiliency of Agrigenomics Research.Life (Basel, Switzerland) · 2022Review
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- SPIN enables high throughput species identification of archaeological bone by proteomics.Nature communications · 2022Article
- Genetic diversity, evolution and selection in the major histocompatibility complex DRB and DQB loci in the family Equidae.BMC genomics · 2020Article
- Mitochondrial genomes and genetic structure of the Kemp's ridley sea turtle (Ecology and evolution · 2020Article
- Comprehensive genome and transcriptome analyses reveal genetic relationship, selection signature, and transcriptome landscape of small-sized Korean native Jeju horse.Scientific reports · 2019Article
- Whole genome sequencing analysis of horse populations inhabiting the Korean Peninsula and Przewalski's horse.Genes & genomics · 2019Article
- The horse Y chromosome as an informative marker for tracing sire lines.Scientific reports · 2019Article
- Identification of piRNAs and piRNA clusters in the testes of the Mongolian horse.Scientific reports · 2019Article
- Draft genome of the river water buffalo.Ecology and evolution · 2019Article
- Cost-effective assembly of the African wild dog (Lycaon pictus) genome using linked reads.GigaScience · 2019Article
- Detecting the Population Structure and Scanning for Signatures of Selection in Horses (Evolutionary bioinformatics online · 2018Article
Corrections and comments
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Authors and funding
25 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Karyotypic diversification is more prominent in Equus species than in other mammals. Here, using next generation sequencing technology, we generated and de novo assembled quality genomes sequences for a male wild horse (Przewalski's horse) and a male domestic horse (Mongolian horse), with about 93-fold and 91-fold coverage, respectively. Portion of Y chromosome from wild horse assemblies (3 M bp) and Mongolian horse (2 M bp) were also sequenced and de novo assembled. We confirmed a Robertsonian translocation event through the wild horse's chromosomes 23 and 24, which contained sequences that were highly homologous with those on the domestic horse's chromosome 5. The four main types of rearrangement, insertion of unknown origin, inserted duplication, inversion, and relocation, are not evenly distributed on all the chromosomes, and some chromosomes, such as the X chromosome, contain more rearrangements than others, and the number of inversions is far less than the number of insertions and relocations in the horse genome. Furthermore, we discovered the percentages of LINE_L1 and LTR_ERV1 are significantly increased in rearrangement regions. The analysis results of the two representative Equus species genomes improved our knowledge of Equus chromosome rearrangement and karyotype evolution.
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