Evidence map›Paper›PMID 24827820›Full record

ArticlePloS one2014

Nitrite-reductase and peroxynitrite isomerization activities of Methanosarcina acetivorans protoglobin.

Paolo Ascenzi, Loris Leboffe, Alessandra Pesce, Chiara Ciaccio, Diego Sbardella, Martino Bolognesi, Massimo Coletta

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Hemoglobin as an oxygen gasoreceptor.Acta biochimica Polonica · 2025
    Review
  2. Nitrite Reductase Activity of Ferrous Nitrobindins: A Comparative Study.International journal of molecular sciences · 2023
    Article
  3. Article
  4. Ferric nitrosylated myoglobin catalyzes peroxynitrite scavenging.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2020
    Article
  5. Review
  6. Article
  7. Influence of Background HJournal of the American Society for Mass Spectrometry · 2018
    Article
  8. Article
  9. Peroxynitrite scavenging by Campylobacter jejuni truncated hemoglobin P.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2017
    Article
  10. The nitrite reductase activity of horse heart carboxymethylated-cytochrome c is modulated by cardiolipin.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2016
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Paolo AscenziInterdepartmental Laboratory of Electron Microscopy, University Roma Tre, Roma, Italy; National Institute of Biostructures and Biosystems, Roma, Italy.
Loris LeboffeInterdepartmental Laboratory of Electron Microscopy, University Roma Tre, Roma, Italy.
Alessandra PesceDepartment of Physics, University of Genova, Genova, Italy.
Chiara CiaccioDepartment of Clinical Sciences and Translational Medicine, University of Roma "Tor Vergata", Roma, Italy; Interuniversity Consortium for the Research on the Chemistry of Metals in Biological Systems, Bari, Italy.
Diego SbardellaDepartment of Clinical Sciences and Translational Medicine, University of Roma "Tor Vergata", Roma, Italy; Interuniversity Consortium for the Research on the Chemistry of Metals in Biological Systems, Bari, Italy.
Martino BolognesiDepartment of Bioscience, University of Milano, Milano, Italy.
Massimo ColettaDepartment of Clinical Sciences and Translational Medicine, University of Roma "Tor Vergata", Roma, Italy; Interuniversity Consortium for the Research on the Chemistry of Metals in Biological Systems, Bari, Italy.
Roma Tre University · ITUniversity of Rome Tor Vergata · ITConsorzio Interuniversitario Reattività Chimica e Catalisi · ITUniversity of Genoa · ITUniversity of Milan · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Within the globin superfamily, protoglobins (Pgb) belong phylogenetically to the same cluster of two-domain globin-coupled sensors and single-domain sensor globins. Multiple functional roles have been postulated for Methanosarcina acetivorans Pgb (Ma-Pgb), since the detoxification of reactive nitrogen and oxygen species might co-exist with enzymatic activity(ies) to facilitate the conversion of CO to methane. Here, the nitrite-reductase and peroxynitrite isomerization activities of the CysE20Ser mutant of Ma-Pgb (Ma-Pgb*) are reported and analyzed in parallel with those of related heme-proteins. Kinetics of nitrite-reductase activity of ferrous Ma-Pgb* (Ma-Pgb*-Fe(II)) is biphasic and values of the second-order rate constant for the reduction of NO2- to NO and the concomitant formation of nitrosylated Ma-Pgb*-Fe(II) (Ma-Pgb*-Fe(II)-NO) are k(app1)= 9.6 ± 0.2 M(-1) s(-1) and k(app2) = 1.2 ± 0.1 M(-1) s(-1) (at pH 7.4 and 20 °C). The k(app1) and k(app2) values increase by about one order of magnitude for each pH unit decrease, between pH 8.3 and 6.2, indicating that the reaction requires one proton. On the other hand, kinetics of peroxynitrite isomerization catalyzed by ferric Ma-Pgb* (Ma-Pgb*-Fe(III)) is monophasic and values of the second order rate constant for peroxynitrite isomerization by Ma-Pgb*-Fe(III) and of the first order rate constant for the spontaneous conversion of peroxynitrite to nitrate are h(app) = 3.8 × 10(4 )M(-1) s(-1) and h0 = 2.8 × 10(-1) s(-1) (at pH 7.4 and 20 °C). The pH-dependence of hon and h0 values reflects the acid-base equilibrium of peroxynitrite (pKa = 6.7 and 6.9, respectively; at 20 °C), indicating that HOONO is the species that reacts preferentially with the heme-Fe(III) atom. These results highlight the potential role of Pgbs in the biosynthesis and scavenging of reactive nitrogen and oxygen species.

Indexed as

Acid-Base EquilibriumArchaeal ProteinsEscherichia coliFerric CompoundsFerrous CompoundsGene ExpressionGlobinsHemeHydrogen-Ion ConcentrationKineticsMethanosarcinaModels, MolecularNitrite ReductasesOxidation-ReductionPeroxynitrous AcidReactive Nitrogen SpeciesArchaeal ProteinsFerric CompoundsFerrous CompoundsGlobinsHemeNitrite ReductasesPeroxynitrous AcidReactive Nitrogen SpeciesReactive Oxygen SpeciesRecombinant Proteins

Identifiers

PMID24827820
PMCPMC4020757
OpenAlexW2034171864

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.