ReviewMicrobiology insights2013
The use of metagenomic approaches to analyze changes in microbial communities.
Review in Microbiology insights, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
23 citing papers in PubMed.
- Novel Insights into Metagenomic-Assembled Genomes from Layer Chicken Housing Environment.International journal of molecular sciences · 2026Article
- Soil microbial resources: Unlocking sustainable strategies for crop productivity and soil health.Current research in microbial sciences · 2025Review
- Modulation of chicken gut microbiota for enhanced productivity and health: A review.Veterinary world · 2024Review
- Improved Equine Fecal Microbiome Characterization Using Target Enrichment by Hybridization Capture.Animals : an open access journal from MDPI · 2024Article
- Mycobiome analysis of leaf, root, and soil of symptomatic oil palm trees (Frontiers in microbiology · 2024Article
- Viral metagenomics reveals diverse viruses in the fecal samples of children with diarrhea.Virologica Sinica · 2022Article
- High-throughput molecular analyses of microbiomes as a tool to monitor the wellbeing of aquatic environments.Microbial biotechnology · 2021Review
- Metagenome SNP calling via read-colored de Bruijn graphs.Bioinformatics (Oxford, England) · 2021Article
- Improved Microbial Community Characterization of 16S rRNA via Metagenome Hybridization Capture Enrichment.Frontiers in microbiology · 2021Article
- Metagenomic applications in exploration and development of novel enzymes from nature: a review.Journal, genetic engineering & biotechnology · 2020Review
- Announcing the Availability of a Culture Collection of Uranium-Resistant Microbial Assemblages (CURMA) Obtained from Metalliferous Soils of the Savannah River Site, USA.Microbiology resource announcements · 2020Article
- Entomopathogenic nematode-associated microbiota: from monoxenic paradigm to pathobiome.Microbiome · 2020Article
- Analysis of viral diversity in stool samples from infants and children with acute gastroenteritis in Kuwait using Metagenomics approach.Virology journal · 2020Article
- Microbial Decolorization of Triazo Dye, Direct Blue 71: An Optimization Approach Using Response Surface Methodology (RSM) and Artificial Neural Network (ANN).BioMed research international · 2020Article
- Characterization of Pneumococcal Colonization Dynamics and Antimicrobial Resistance Using Shotgun Metagenomic Sequencing in Intensively Sampled South African Infants.Frontiers in public health · 2020Article
- COThe ISME journal · 2019Article
- Tissue Microbiome of Norway Spruce Affected by Heterobasidion-Induced Wood Decay.Microbial ecology · 2019Article
- Abundance estimation and differential testing on strain level in metagenomics data.Bioinformatics (Oxford, England) · 2017Article
- Diversity of Extremely Halophilic Archaeal and Bacterial Communities from Commercial Salts.Frontiers in microbiology · 2017Article
- Metagenomics and Bioinformatics in Microbial Ecology: Current Status and Beyond.Microbes and environments · 2016Review
Corrections and comments
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Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Microbes are the most abundant biological entities found in the biosphere. Identification and measurement of microorganisms (including viruses, bacteria, archaea, fungi, and protists) in the biosphere cannot be readily achieved due to limitations in culturing methods. A non-culture based approach, called "metagenomics", was developed that enabled researchers to comprehensively analyse microbial communities in different ecosystems. In this study, we highlight recent advances in the field of metagenomics for analyzing microbial communities in different ecosystems ranging from oceans to the human microbiome. Developments in several bioinformatics approaches are also discussed in context of microbial metagenomics that include taxonomic systems, sequence databases, and sequence-alignment tools. In summary, we provide a snapshot for the recent advances in metagenomics approach for analyzing changes in the microbial communities in different ecosystems.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.