Evidence map›Paper›PMID 24824990›Full record

ArticlePloS one2014

Characterization of nontypable Haemophilus influenzae isolates recovered from adult patients with underlying chronic lung disease reveals genotypic and phenotypic traits associated with persistent infection.

Junkal Garmendia, Cristina Viadas, Laura Calatayud, Joshua Chang Mell, Pau Martí-Lliteras, Begoña Euba, Enrique Llobet, Carmen Gil, José Antonio Bengoechea, Rosemary J Redfield and 1 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Whole-genome and pan-genome analyses reveal genomic differences among nontypeableFrontiers in cellular and infection microbiology · 2026
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  6. Case Report: Whole-Genome Sequencing of Serially CollectedFrontiers in cellular and infection microbiology · 2022
    Article
  7. Article
  8. Learning from -omics strategies applied to uncoverComputational and structural biotechnology journal · 2021
    Review
  9. Chronic infection by nontypeableERJ open research · 2021
    Article
  10. Molecular epidemiology of invasive Haemophilus influenzae disease in Portugal: an update of the post-vaccine period, 2011-2018.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2020
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Ampicillin resistance inInternational journal of chronic obstructive pulmonary disease · 2017
    Article
  17. Article
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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Junkal GarmendiaInstituto de Agrobiotecnología, CSIC-Universidad Pública Navarra-Gobierno Navarra, Mutilva, Spain; Centro de Investigación Biomédica en Red de Enfermedades Respiratorias (CIBERES), Madrid, Spain; Laboratory Microbial Pathogenesis, Fundación Investigación Sanitaria Illes Balears, Bunyola, Spain.
Cristina ViadasInstituto de Agrobiotecnología, CSIC-Universidad Pública Navarra-Gobierno Navarra, Mutilva, Spain.
Laura CalatayudCentro de Investigación Biomédica en Red de Enfermedades Respiratorias (CIBERES), Madrid, Spain; Microbiology Department, University Hospital Bellvitge, IDIBELL, University of Barcelona, Barcelona, Spain.
Joshua Chang MellDepartment of Zoology, University British Columbia, Vancouver, British Columbia, Canada; Department of Microbiology and Immunology, Drexel University College of Medicine, Philadelphia, Pennsylvania, United States of America.
Pau Martí-LliterasCentro de Investigación Biomédica en Red de Enfermedades Respiratorias (CIBERES), Madrid, Spain; Laboratory Microbial Pathogenesis, Fundación Investigación Sanitaria Illes Balears, Bunyola, Spain.
Begoña EubaInstituto de Agrobiotecnología, CSIC-Universidad Pública Navarra-Gobierno Navarra, Mutilva, Spain; Centro de Investigación Biomédica en Red de Enfermedades Respiratorias (CIBERES), Madrid, Spain.
Enrique LlobetCentro de Investigación Biomédica en Red de Enfermedades Respiratorias (CIBERES), Madrid, Spain; Laboratory Microbial Pathogenesis, Fundación Investigación Sanitaria Illes Balears, Bunyola, Spain.
Carmen GilInstituto de Agrobiotecnología, CSIC-Universidad Pública Navarra-Gobierno Navarra, Mutilva, Spain.
José Antonio BengoecheaCentro de Investigación Biomédica en Red de Enfermedades Respiratorias (CIBERES), Madrid, Spain; Laboratory Microbial Pathogenesis, Fundación Investigación Sanitaria Illes Balears, Bunyola, Spain; Consejo Superior de Investigaciones Científicas (CSIC), Madrid, Spain.
Rosemary J RedfieldDepartment of Zoology, University British Columbia, Vancouver, British Columbia, Canada.
Josefina LiñaresCentro de Investigación Biomédica en Red de Enfermedades Respiratorias (CIBERES), Madrid, Spain; Microbiology Department, University Hospital Bellvitge, IDIBELL, University of Barcelona, Barcelona, Spain.
Agrobiotechnology Institute · ESCentro de Investigación Biomédica en Red de Enfermedades Respiratorias · ESInstitut d'Investigació Biomédica de Bellvitge · ESUniversity of British Columbia · CA

Funding

The extent and limits of natural transformation in Haemophilus influenzaeF32AI084427 · NIAID · UNIVERSITY OF BRITISH COLUMBIA · PI MELL, JOSHUA CHANG · 2011 to 2013
$171k
NIAID NIH HHS 5F32AI084427NIAID NIH HHS F32 AI084427
6 · The paper itself

Abstract

Nontypable Haemophilus influenzae (NTHi) has emerged as an important opportunistic pathogen causing infection in adults suffering obstructive lung diseases. Existing evidence associates chronic infection by NTHi to the progression of the chronic respiratory disease, but specific features of NTHi associated with persistence have not been comprehensively addressed. To provide clues about adaptive strategies adopted by NTHi during persistent infection, we compared sequential persistent isolates with newly acquired isolates in sputa from six patients with chronic obstructive lung disease. Pulse field gel electrophoresis (PFGE) identified three patients with consecutive persistent strains and three with new strains. Phenotypic characterisation included infection of respiratory epithelial cells, bacterial self-aggregation, biofilm formation and resistance to antimicrobial peptides (AMP). Persistent isolates differed from new strains in showing low epithelial adhesion and inability to form biofilms when grown under continuous-flow culture conditions in microfermenters. Self-aggregation clustered the strains by patient, not by persistence. Increasing resistance to AMPs was observed for each series of persistent isolates; this was not associated with lipooligosaccharide decoration with phosphorylcholine or with lipid A acylation. Variation was further analyzed for the series of three persistent isolates recovered from patient 1. These isolates displayed comparable growth rate, natural transformation frequency and murine pulmonary infection. Genome sequencing of these three isolates revealed sequential acquisition of single-nucleotide variants in the AMP permease sapC, the heme acquisition systems hgpB, hgpC, hup and hxuC, the 3-deoxy-D-manno-octulosonic acid kinase kdkA, the long-chain fatty acid transporter ompP1, and the phosphoribosylamine glycine ligase purD. Collectively, we frame a range of pathogenic traits and a repertoire of genetic variants in the context of persistent infection by NTHi.

Indexed as

PhenotypeAdultAlveolar Epithelial CellsAnalysis of VarianceAnimalsAntimicrobial Cationic PeptidesBacterial AdhesionBase SequenceBiofilmsDNA PrimersElectrophoresis, Gel, Pulsed-FieldGenotypeHaemophilus influenzaeHumansMiceMolecular Sequence DataAntimicrobial Cationic PeptidesDNA Primers

Identifiers

PMID24824990
PMCPMC4019658
OpenAlexW1985457542

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.