Evidence map›Paper›PMID 24824789›Full record

ArticleRNA biology2014

Long intergenic non-coding RNA HOTAIRM1 regulates cell cycle progression during myeloid maturation in NB4 human promyelocytic leukemia cells.

Xueqing Zhang, Sherman M Weissman, Peter E Newburger

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 106 papers.

0numbers the graph read from it
0cells of the map it votes in
106citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

106 citing papers in PubMed, 168 citations in OpenAlex.

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  15. Expression ofFrontiers in oncology · 2024
    Article
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46 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Xueqing ZhangDepartment of Pediatrics; University of Massachusetts Medical School; Worcester, MA USA.
Sherman M WeissmanDepartment of Genetics; Yale University; New Haven, CT USA.
Peter E NewburgerDepartment of Pediatrics; University of Massachusetts Medical School; Worcester, MA USA; Department of Cancer Biology; University of Massachusetts Medical School; Worcester, MA USA.
University of Massachusetts Chan Medical School · USUniversity of New Haven · US

Funding

HOX cluster intergenic non-coding RNAs in myeloid differentiation and functionR01DK054369 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI NEWBURGER, PETER E, WEISSMAN, SHERMAN MORTON · 1999 to 2013
$7.2M
NIDDK NIH HHS DK054369NIDDK NIH HHS R01 DK054369
6 · The paper itself

Abstract

HOTAIRM1 is a long intergenic non-coding RNA encoded in the human HOXA gene cluster, with gene expression highly specific for maturing myeloid cells. Knockdown of HOTAIRM1 in the NB4 acute promyelocytic leukemia cell line retarded all-trans retinoid acid (ATRA)-induced granulocytic differentiation, resulting in a significantly larger population of immature and proliferating cells that maintained cell cycle progression from G1 to S phases. Correspondingly, HOTAIRM1 knockdown resulted in retained expression of many otherwise ATRA-suppressed cell cycle and DNA replication genes, and abated ATRA induction of cell surface leukocyte activation, defense response, and other maturation-related genes. Resistance to ATRA-induced cell cycle arrest at the G1/S phase transition in knockdown cells was accompanied by retained expression of ITGA4 (CD49d) and decreased induction of ITGAX (CD11c). The coupling of cell cycle progression with temporal dynamics in the expression patterns of these integrin genes suggests a regulated switch to control the transit from the proliferative phase to granulocytic maturation. Furthermore, ITGAX was among a small number of genes showing perturbation in transcript levels upon HOTAIRM1 knockdown even without ATRA treatment, suggesting a direct pathway of regulation. These results indicate that HOTAIRM1 provides a regulatory link in myeloid maturation by modulating integrin-controlled cell cycle progression at the gene expression level.

Indexed as

CD11c AntigenCell CycleCell Cycle CheckpointsCell DifferentiationCell Line, TumorCell ProliferationCluster AnalysisGene Expression ProfilingGene Expression Regulation, LeukemicGene Knockdown TechniquesHumansIntegrin alpha4Leukemia, Promyelocytic, AcuteRNA, Long NoncodingTretinoinCD11c AntigenHOTAIR long untranslated RNA, humanIntegrin alpha4RNA, Long NoncodingTretinoincell cyclegene expressiongranulocyteHOX clusterintegrinlong noncoding RNAmyeloidmyelopoiesis

Identifiers

PMID24824789
PMCPMC4156508
OpenAlexW1965259640

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.