ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2014
Constructing a dense genetic linkage map and mapping QTL for the traits of flower development in Brassica carinata.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed, 31 citations in OpenAlex.
- Genetic diversity and population structure in Ethiopian mustard (Brassica carinata A. Braun) revealed by high-density DArTSeq SNP genotyping.BMC genomics · 2025Article
- Identification of quantitative trait loci and candidate genes for pod shatter resistance in Brassica carinata.BMC plant biology · 2024Article
- NJournal of translational internal medicine · 2024Article
- A Brassica carinata pan-genome platform for Brassica crop improvement.Plant communications · 2024Article
- Article
- Improving seed size, seed weight and seedling emergence in Camelina sativa by overexpressing the Atsob3-6 gene variant.Transgenic research · 2020Article
- Narrow genetic base shapes population structure and linkage disequilibrium in an industrial oilseed crop, Brassica carinata A. Braun.Scientific reports · 2020Article
- Molecular mapping of QTL alleles of Brassica oleracea affecting days to flowering and photosensitivity in spring Brassica napus.PloS one · 2018Article
- Identifying hybridization and admixture using SNPs: application of the DArTseq platform in phylogeographic research on vertebrates.Royal Society open science · 2017Article
- Exposure to trace amounts of sulfonylurea herbicide tribenuron-methyl causes male sterility in 17 species or subspecies of cruciferous plants.BMC plant biology · 2017Article
- In-depth genome characterization of a Brazilian common bean core collection using DArTseq high-density SNP genotyping.BMC genomics · 2017Article
- Molecular Diversity Analysis and Genetic Mapping of Pod Shatter Resistance Loci inFrontiers in plant science · 2017Article
- Investigation of the Genetic Diversity and Quantitative Trait Loci Accounting for Important Agronomic and Seed Quality Traits inFrontiers in plant science · 2017Article
- The application of GBS markers for extending the dense genetic map of rye (Secale cereale L.) and the localization of the Rfc1 gene restoring male fertility in plants with the C source of sterility-inducing cytoplasm.Journal of applied genetics · 2016Article
- Genome-wide association study reveals the genetic architecture of flowering time in rapeseed (Brassica napus L.).DNA research : an international journal for rapid publication of reports on genes and genomes · 2016Article
- Co-linearity and divergence of the A subgenome of Brassica juncea compared with other Brassica species carrying different A subgenomes.BMC genomics · 2016Article
- Introgressing Subgenome Components fromFrontiers in plant science · 2016Article
- Article
Corrections and comments
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Authors and funding
11 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
key messageAn integrated dense genetic linkage map was constructed in a B. carinata population and used for comparative genome analysis and QTL identification for flowering time. An integrated dense linkage map of Brassica carinata (BBCC) was constructed in a doubled haploid population based on DArT-Seq(TM) markers. A total of 4,031 markers corresponding to 1,366 unique loci were mapped including 639 bins, covering a genetic distance of 2,048 cM. We identified 136 blocks and islands conserved in Brassicaceae, which showed a feature of hexaploidisation representing the suggested ancestral crucifer karyotype. The B and C genome of B. carinata shared 85 % of commonly conserved blocks with the B genome of B. nigra/B. juncea and 80 % of commonly conserved blocks with the C genome of B. napus, and shown frequent structural rearrangements such as insertions and inversions. Up to 24 quantitative trait loci (QTL) for flowering and budding time were identified in the DH population. Of these QTL, one consistent QTL (qFT.B4-2) for flowering time was identified in all of the environments in the J block of the B4 linkage group, where a group of genes for flowering time were aligned in A. thaliana. Another major QTL for flowering time under a winter-cropped environment was detected in the E block of C6, where the BnFT-C6 gene was previously localised in B. napus. This high-density map would be useful not only to reveal the genetic variation in the species with QTL analysis and genome sequencing, but also for other applications such as marker-assisted selection and genomic selection, for the African mustard improvement.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.