Evidence map›Paper›PMID 24824517›Full record

ArticlePloS one2014

Splice variants of perlucin from Haliotis laevigata modulate the crystallisation of CaCO3.

Tanja Dodenhof, Frank Dietz, Sebastian Franken, Ingo Grunwald, Sørge Kelm

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Glycan Binding Profiling of Jacalin-Related Lectins from theInternational journal of molecular sciences · 2019
    Article
  9. Article
  10. In-depth proteomic analyses ofProteome science · 2018
    Article
  11. Intrinsically disordered proteins and biomineralization.Matrix biology : journal of the International Society for Matrix Biology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Tanja DodenhofCentre for Biomolecular Interactions Bremen, Department of Biology and Chemistry, University Bremen, Bremen, Germany.
Frank DietzCentre for Biomolecular Interactions Bremen, Department of Biology and Chemistry, University Bremen, Bremen, Germany.
Sebastian FrankenDepartment of Biochemistry and Molecular Biology, Rheinische Friedrich-Wilhelms- University, Bonn, Bonn, Germany.
Ingo GrunwaldDepartment Adhesives and Chemistry of Polymers, Fraunhofer Institute for Manufacturing Technology and Advanced Materials (IFAM), Bremen, Germany.
Sørge KelmCentre for Biomolecular Interactions Bremen, Department of Biology and Chemistry, University Bremen, Bremen, Germany.
University of Bremen · DEFraunhofer Institute for Manufacturing Technology and Advanced Materials · DEUniversity of Bonn · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Perlucin is one of the proteins of the organic matrix of nacre (mother of pearl) playing an important role in biomineralisation. This nacreous layer can be predominately found in the mollusc lineages and is most intensively studied as a compound of the shell of the marine Australian abalone Haliotis laevigata. A more detailed analysis of Perlucin will elucidate some of the still unknown processes in the complex interplay of the organic/inorganic compounds involved in the formation of nacre as a very interesting composite material not only from a life science-based point of view. Within this study we discovered three unknown Perlucin splice variants of the Australian abalone H. laevigata. The amplified cDNAs vary from 562 to 815 base pairs and the resulting translation products differ predominantly in the absence or presence of a varying number of a 10 mer peptide C-terminal repeat. The splice variants could further be confirmed by matrix-assisted laser desorption ionisation time of flight mass spectrometry (MALDI-ToF MS) analysis as endogenous Perlucin, purified from decalcified abalone shell. Interestingly, we observed that the different variants expressed as maltose-binding protein (MBP) fusion proteins in E. coli showed strong differences in their influence on precipitating CaCO3 and that these differences might be due to a splice variant-specific formation of large protein aggregates influenced by the number of the 10 mer peptide repeats. Our results are evidence for a more complex situation with respect to Perlucin functional regulation by demonstrating that Perlucin splice variants modulate the crystallisation of calcium carbonate. The identification of differentially behaving Perlucin variants may open a completely new perspective for the field of nacre biomineralisation.

Indexed as

AnimalsBayes TheoremBlotting, WesternCalcium CarbonateChlorocebus aethiopsComputational BiologyCOS CellsCrystallizationDNA, ComplementaryDNA PrimersElectrophoresis, Gel, Two-DimensionalEscherichia coliGastropodaLectinsMaltose-Binding ProteinsModels, GeneticCalcium CarbonateDNA, ComplementaryDNA PrimersLectinsMaltose-Binding ProteinsNacreperlucin, Haliotis laevigataProtein Isoforms

Identifiers

PMID24824517
PMCPMC4019660
OpenAlexW2092608840

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.