Evidence map›Paper›PMID 24824477›Full record

ArticleThe Analyst2014

Evaluating the sensitivity of hybridization-based epigenotyping using a methyl binding domain protein.

Brandon W Heimer, Tatyana A Shatova, Jungkyu K Lee, Kaja Kaastrup, Hadley D Sikes

Open access · hybridAbstract read
In one paragraph

Article in The Analyst, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Brandon W HeimerDepartment of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02129, USA. sikes@mit.edu.
Tatyana A Shatova
Jungkyu K Lee
Kaja Kaastrup
Hadley D Sikes
Massachusetts Institute of Technology · USKyungpook National University · KR

Funding

TOXICOLOGY CORE UNITP30ES002109 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI LEVINE, STUART S · 1985 to 2020
$25.6M
NIEHS NIH HHS P30 ES002109NIEHS NIH HHS P30-ES002109
6 · The paper itself

Abstract

Hypermethylation of CpG islands in gene promoter regions has been shown to be a predictive biomarker for certain diseases. Most current methods for methylation profiling are not well-suited for clinical analysis. Here, we report the development of an inexpensive device and an epigenotyping assay with a format conducive to multiplexed analysis.

Indexed as

CpG IslandsDNA MethylationAnimalsDNA-Binding ProteinsEquipment DesignHumansMiceMicrofluidic Analytical TechniquesNucleic Acid HybridizationPromoter Regions, GeneticDNA-Binding ProteinsMbd1 protein, mouse

Identifiers

PMID24824477
PMCPMC4312478
OpenAlexW2009794924

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.