Evidence map›Paper›PMID 24821761›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

YY1 is indispensable for Lgr5+ intestinal stem cell renewal.

Ansu O Perekatt, Michael J Valdez, Melanie Davila, A Hoffman, Edward M Bonder, Nan Gao, Michael P Verzi

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 62 citations in OpenAlex.

  1. Loss of Intestinal MSTN Promotes GLP-1 Secretion Through SGLT1 Palmitoylation.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
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  8. Article
  9. Transcriptional regulation of metabolism in the intestinal epithelium.American journal of physiology. Gastrointestinal and liver physiology · 2023
    Review
  10. ROS signaling-induced mitochondrial Sgk1 expression regulates epithelial cell renewal.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Article
  12. Review
  13. Article
  14. YY1 Silencing Induces 5-Fluorouracil-Resistance andInternational journal of molecular sciences · 2021
    Article
  15. Article
  16. Article
  17. The cellular niche for intestinal stem cells: a team effort.Cell regeneration (London, England) · 2021
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ansu O PerekattDepartment of Genetics, Human Genetics Institute of New Jersey, Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, Piscataway, NJ 08854; and.
Michael J ValdezDepartment of Genetics, Human Genetics Institute of New Jersey, Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, Piscataway, NJ 08854; and.
Melanie DavilaDepartment of Genetics, Human Genetics Institute of New Jersey, Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, Piscataway, NJ 08854; and.
A HoffmanDepartment of Genetics, Human Genetics Institute of New Jersey, Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, Piscataway, NJ 08854; and.
Edward M BonderDepartment of Biological Sciences, Rutgers, The State University of New Jersey, Newark, NJ 07102.
Nan GaoDepartment of Biological Sciences, Rutgers, The State University of New Jersey, Newark, NJ 07102.
Michael P VerziDepartment of Genetics, Human Genetics Institute of New Jersey, Cancer Institute of New Jersey, Rutgers, The State University of New Jersey, Piscataway, NJ 08854; and mverzi@gmail.com.
Rutgers, The State University of New Jersey · US

Funding

Regulation of Apical-Basal Cell polarity during Intestinal Epithelial MorphogenesK01DK085194 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI GAO, NAN · 2010 to 2014
$728k
Mechanisms underlying YY1 control of intestinal epithelial homeostasisR03DK099251 · NIDDK · RUTGERS, THE STATE UNIV OF N.J. · PI VERZI, MICHAEL P. · 2013 to 2014
$155k
NIDDK NIH HHS K01 DK085194NIDDK NIH HHS K01DK085194NIDDK NIH HHS K01DK08886NIDDK NIH HHS R03 DK099251NIDDK NIH HHS R03DK099251
6 · The paper itself

Abstract

The intestinal stem cell fuels the highest rate of tissue turnover in the body and has been implicated in intestinal disease and cancer; understanding the regulatory mechanisms controlling intestinal stem cell physiology is of great importance. Here, we provide evidence that the transcription factor YY1 is essential for intestinal stem cell renewal. We observe that YY1 loss skews normal homeostatic cell turnover, with an increase in proliferating crypt cells and a decrease in their differentiated villous progeny. Increased crypt cell numbers come at the expense of Lgr5(+) stem cells. On YY1 deletion, Lgr5(+) cells accelerate their commitment to the differentiated population, exhibit increased levels of apoptosis, and fail to maintain stem cell renewal. Loss of Yy1 in the intestine is ultimately fatal. Mechanistically, YY1 seems to play a role in stem cell energy metabolism, with mitochondrial complex I genes bound directly by YY1 and their transcript levels decreasing on YY1 loss. These unappreciated YY1 functions broaden our understanding of metabolic regulation in intestinal stem cell homeostasis.

Indexed as

AnimalsCell DivisionChromatin ImmunoprecipitationGene Expression ProfilingGene Expression RegulationIntestinesMiceMice, KnockoutMicroarray AnalysisMicroscopy, Electron, TransmissionMitochondriaReverse Transcriptase Polymerase Chain ReactionStem CellsYY1 Transcription FactorYY1 Transcription Factorcrypt base columnar cellmitochondriatranscriptional regulation

Identifiers

PMID24821761
PMCPMC4040551
OpenAlexW2003902918

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.