Evidence map›Paper›PMID 24821759›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Behçet disease-associated MHC class I residues implicate antigen binding and regulation of cell-mediated cytotoxicity.

Michael J Ombrello, Yohei Kirino, Paul I W de Bakker, Ahmet Gül, Daniel L Kastner, Elaine F Remmers

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed, 4 pooled it
12.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 4 syntheses or guidelines pooled it, 140 citations in OpenAlex.

  1. Behçet's Disease: A Comprehensive Review on the Role ofInternational journal of molecular sciences · 2023
    Pooled it
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  3. Pooled it
  4. Pooled it
  5. Review
  6. Article
  7. [Role of HLA genetic variants in autoimmune diseases].Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2026
    Review
  8. Article
  9. Management of Severe Behçet's Disease.Current rheumatology reports · 2026
    Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
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  17. Article
  18. The roles of immune cells in Behçet's disease.Advances in rheumatology (London, England) · 2023
    Review
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  20. Review

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 4 countries.

Michael J OmbrelloTranslational Genetics and Genomics Unit, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, MD 20892;Inflammatory Disease Section, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892; ombrellomj@mail.nih.gov kastnerd@mail.nih.gov.
Yohei KirinoInflammatory Disease Section, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892;Department of Internal Medicine and Clinical Immunology, Yokohama City University Graduate School of Medicine and Faculty of Medicine, Yokohama City 236-0004, Japan;
Paul I W de BakkerDivision of Genetics, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115;Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA 02141;Departments of Medical Genetics andEpidemiology, University Medical Center Utrecht, 3584 CX, Utrecht, The Netherlands; and.
Ahmet GülDivision of Rheumatology, Department of Internal Medicine, Istanbul Faculty of Medicine, Istanbul University, Istanbul 34093, Turkey.
Daniel L KastnerInflammatory Disease Section, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892; ombrellomj@mail.nih.gov kastnerd@mail.nih.gov.
Elaine F RemmersInflammatory Disease Section, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892;
National Human Genome Research Institute · USBrigham and Women's Hospital · USIstanbul University · TRNational Institute of Arthritis and Musculoskeletal and Skin Diseases · USNational Institutes of Health · US

Funding

Genetics and pathophysiology of systemic juvenile idiopathic arthritis and other complex autoinflammatory diseasesZIAAR041198 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI OMBRELLO, MICHAEL · 2014 to 2025
$14.4M
Genetics, Natural History, and Pathophysiology of Behcet's DiseaseZIAHG200374 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI KASTNER, DANIEL · 2011 to 2020
$10.5M
Fine-mapping the MHC associations in rheumatoid arthritis from GWAS dataR01AR062886 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI RAYCHAUDHURI, SOUMYA · 2012 to 2013
$783k
Intramural NIH HHS Z99 AR999999Intramural NIH HHS ZIA AR041198NIAMS NIH HHS N1R01AR062886-01NIAMS NIH HHS R01 AR062886
6 · The paper itself

Abstract

The HLA protein, HLA-B*51, encoded by HLA-B in MHC, is the strongest known genetic risk factor for Behçet disease (BD). Associations between BD and other factors within the MHC have been reported also, although strong regional linkage disequilibrium complicates their confident disentanglement from HLA-B*51. In the current study, we examined a combination of directly obtained and imputed MHC-region SNPs, directly obtained HLA-B locus types, and imputed classical HLA types with their corresponding polymorphic amino acid residues for association with BD in 1,190 cases and 1,257 controls. SNP mapping with logistic regression of the MHC identified the HLA-B/MICA region and the region between HLA-F and HLA-A as independently associated with BD (P < 1.7 × 10(-8)). HLA-B*51, -A*03, -B*15, -B*27, -B*49, -B*57, and -A*26 each contributed independently to BD risk. We directly examined rs116799036, a noncoding SNP upstream of HLA-B that was recently suggested to underlie the association of HLA-B*51 with BD, but we were unable to replicate that finding in our collection. Instead, we mapped the BD association to seven MHC class I (MHC-I) amino acid residues, including anchor residues that critically define the selection and binding of peptides to MHC-I molecules, residues known to influence MHC-I-killer immunoglobulin-like receptor interactions, and a residue located in the signal peptide of HLA-B. The locations of these variants collectively implicate MHC-I peptide binding in the pathophysiology of BD. Furthermore, several lines of evidence suggest a role for altered regulation of cellular cytotoxicity in BD pathogenesis.

Indexed as

AllelesBehcet SyndromeGenes, MHC Class IGenetic Predisposition to DiseaseGenotypeHaplotypesHistocompatibility Antigens Class IHLA-B51 AntigenHumansImmunoglobulinsLinkage DisequilibriumLogistic ModelsMultivariate AnalysisOdds RatioPolymorphism, Single NucleotideProtein Sorting SignalsHistocompatibility Antigens Class IHLA-B51 AntigenImmunoglobulinsProtein Sorting Signalsantigen presentationautoinflammationHLA imputationkiller immunoglobulin-like receptorsnatural killer cells

Identifiers

PMID24821759
PMCPMC4066484
OpenAlexW2022175407

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.