Evidence map›Paper›PMID 24820206›Full record

ArticleThe Journal of organic chemistry2014

Unusually large deuterium discrimination during spore photoproduct formation.

David M Ames, Gengjie Lin, Yajun Jian, Jean Cadet, Lei Li

Abstract read
In one paragraph

Article in The Journal of organic chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

5 authors.

David M AmesDepartment of Chemistry and Chemical Biology, Indiana University-Purdue University Indianapolis (IUPUI) , 402 North Blackford Street, Indianapolis, Indiana 46202, United States.
Gengjie Lin
Yajun Jian
Jean Cadet
Lei Li

Funding

Enzyme Catalysis of Toluene Degradation and Unusual DNA Photoproduct RepairR00ES017177 · NIEHS · INDIANA UNIVERSITY INDIANAPOLIS · PI LI, LEI · 2009 to 2011
$747k
Enzyme Catalysis of Toluene Degradation and Unusual DNA Photoproduct RepairK99ES017177 · NIEHS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LI, LEI · 2008 to 2009
$167k
NIEHS NIH HHS ES017177NIEHS NIH HHS K99 ES017177NIEHS NIH HHS R00 ES017177
6 · The paper itself

Abstract

The deuterium-labeling strategy has been widely used and proved highly effective in mechanistic investigation of chemical and biochemical reactions. However, it is often hampered by the incomplete label transfer, which subsequently obscures the mechanistic conclusion. During the study of photoinduced generation of 5-thyminyl-5,6-dihydrothymine, which is commonly called the spore photoproduct (SP), the Cadet laboratory found an incomplete (~67%) deuterium transfer in SP formation, which contrasts to the exclusive transfer observed by the Li laboratory. Here, we investigated this discrepancy by re-examining the SP formation using d3-thymidine. We spiked the d3-thymidine with varying amounts of unlabeled thymidine before the SP photochemistry is performed. Strikingly, our data show that the reaction is highly sensitive to the trace protiated thymidine in the starting material. As many as 17-fold enrichment is detected in the formed SP, which may explain the previously observed one-third protium incorporation. Although commercially available deuterated reagents are generally satisfactory as mechanistic probes, our results argue that attention is still needed to the possible interference from the trace protiated impurity, especially when the reaction yield is low and large isotopic discrimination is involved.

Indexed as

DeuteriumPhotochemistrySporesThymidineThymine5-thyminyl-5,6-dihydrothymineDeuteriumThymidineThymine

Identifiers

PMID24820206
PMCPMC4049236

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.