Evidence map›Paper›PMID 24819603›Full record

ArticlePloS one2014

Involvement of MAP3K8 and miR-17-5p in poor virologic response to interferon-based combination therapy for chronic hepatitis C.

Akihito Tsubota, Kaoru Mogushi, Hideki Aizaki, Ken Miyaguchi, Keisuke Nagatsuma, Hiroshi Matsudaira, Tatsuya Kushida, Tomomi Furihata, Hiroshi Tanaka, Tomokazu Matsuura

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.1field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 1 country.

Akihito TsubotaInstitute of Clinical Medicine and Research (ICMR), Jikei University School of Medicine, Kashiwa, Chiba, Japan; Division of Gastroenterology and Hepatology, Kashiwa Hospital, The Jikei University School of Medicine, Kashiwa, Chiba, Japan.
Kaoru MogushiDepartment of Bioinformatics, Medical Research Institute, Tokyo Medical and Dental University, Bunkyo-ku, Tokyo, Japan.
Hideki AizakiDepartment of Virology II, National Institute of Infectious Diseases, Shinjuku-ku, Tokyo, Japan.
Ken MiyaguchiDepartment of Bioinformatics, Medical Research Institute, Tokyo Medical and Dental University, Bunkyo-ku, Tokyo, Japan.
Keisuke NagatsumaInstitute of Clinical Medicine and Research (ICMR), Jikei University School of Medicine, Kashiwa, Chiba, Japan; Division of Gastroenterology and Hepatology, Kashiwa Hospital, The Jikei University School of Medicine, Kashiwa, Chiba, Japan.
Hiroshi MatsudairaInstitute of Clinical Medicine and Research (ICMR), Jikei University School of Medicine, Kashiwa, Chiba, Japan; Division of Gastroenterology and Hepatology, Kashiwa Hospital, The Jikei University School of Medicine, Kashiwa, Chiba, Japan.
Tatsuya KushidaNational Bioscience Database Center, Japan Science and Technology Agency, Chiyoda-ku, Tokyo, Japan.
Tomomi FurihataLaboratory of Pharmacology and Toxicology, Graduate School of Pharmaceutical Science, Chiba University, Chiba, Japan.
Hiroshi TanakaDepartment of Bioinformatics, Medical Research Institute, Tokyo Medical and Dental University, Bunkyo-ku, Tokyo, Japan.
Tomokazu MatsuuraDepartment of Laboratory Medicine, Jikei University School of Medicine, Minato-ku, Tokyo, Japan.
Tokyo Medical and Dental University · JPJikei University Kashiwa hospital · JPJikei University School of Medicine · JPChiba University · JPJapan Science and Technology Agency · JPNational Institute of Infectious Diseases · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite advances in chronic hepatitis C treatment, a proportion of patients respond poorly to treatment. This study aimed to explore hepatic mRNA and microRNA signatures involved in hepatitis C treatment resistance. Global hepatic mRNA and microRNA expression profiles were compared using microarray data between treatment responses. Quantitative real-time polymerase chain reaction validated the gene signatures from 130 patients who were infected with hepatitis C virus genotype 1b and treated with pegylated interferon-alpha and ribavirin combination therapy. The correlation between mRNA and microRNA was evaluated using in silico analysis and in vitro siRNA and microRNA inhibition/overexpression experiments. Multivariate regression analysis identified that the independent variables IL28B SNP rs8099917, hsa-miR-122-5p, hsa-miR-17-5p, and MAP3K8 were significantly associated with a poor virologic response. MAP3K8 and miR-17-5p expression were inversely correlated with treatment response. Furthermore, miR-17-5p repressed HCV production by targeting MAP3K8. Collectively, the data suggest that several molecules and the inverse correlation between mRNA and microRNA contributed to a host genetic refractory hepatitis C treatment response.

Indexed as

Base SequenceCell Line, TumorDrug InteractionsDrug Resistance, ViralGenotypeHepacivirusHepatitis C, ChronicHumansInterferon-alphaLiverMAP Kinase Kinase KinasesMicroRNAsProto-Oncogene ProteinsRNA, MessengerTreatment OutcomeInterferon-alphaMAP3K8 protein, humanMAP Kinase Kinase KinasesMicroRNAsMIRN17 microRNA, humanProto-Oncogene ProteinsRNA, Messenger

Identifiers

PMID24819603
PMCPMC4018277
OpenAlexW2081014302

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.