Evidence map›Paper›PMID 24819052›Full record

ArticlePloS one2014

The LIM domain protein nTRIP6 recruits the mediator complex to AP-1-regulated promoters.

Markus E Diefenbacher, Daniela Reich, Oliver Dahley, Denise Kemler, Margarethe Litfin, Peter Herrlich, Olivier Kassel

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. TRIP6 functions in brain ciliogenesis.Nature communications · 2021
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. An emerging link between LIM domain proteins and nuclear receptors.Cellular and molecular life sciences : CMLS · 2018
    Review
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Markus E DiefenbacherKarlsruhe Institute of Technology (KIT), Institute of Toxicology and Genetics, Karlsruhe, Germany.
Daniela ReichLeibniz Institute for Age Research (Fritz Lipmann Institute), Jena, Germany.
Oliver DahleyKarlsruhe Institute of Technology (KIT), Institute of Toxicology and Genetics, Karlsruhe, Germany.
Denise KemlerKarlsruhe Institute of Technology (KIT), Institute of Toxicology and Genetics, Karlsruhe, Germany.
Margarethe LitfinKarlsruhe Institute of Technology (KIT), Institute of Toxicology and Genetics, Karlsruhe, Germany.
Peter HerrlichLeibniz Institute for Age Research (Fritz Lipmann Institute), Jena, Germany.
Olivier KasselKarlsruhe Institute of Technology (KIT), Institute of Toxicology and Genetics, Karlsruhe, Germany.
Karlsruhe Institute of Technology · DELeibniz Institute on Aging - Fritz Lipmann Institute (FLI) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several LIM domain proteins regulate transcription. They are thought to act through their LIM protein-protein interaction domains as adaptors for the recruitment of transcriptional co-regulators. An intriguing example is nTRIP6, the nuclear isoform of the focal adhesion protein TRIP6. nTRIP6 interacts with AP-1 and enhances its transcriptional activity. nTRIP6 is also essential for the transrepression of AP-1 by the glucocorticoid receptor (GR), by mediating GR tethering to promoter-bound AP-1. Here we report on the molecular mechanism by which nTRIP6 exerts these effects. Both the LIM domains and the pre-LIM region of nTRIP6 are necessary for its co-activator function for AP-1. Discrete domains within the pre-LIM region mediate the dimerization of nTRIP6 at the promoter, which enables the recruitment of the Mediator complex subunits THRAP3 and Med1. This recruitment is blocked by GR, through a competition between GR and THRAP3 for the interaction with the LIM domains of nTRIP6. Thus, nTRIP6 both positively and negatively regulates transcription by orchestrating the recruitment of the Mediator complex to AP-1-regulated promoters.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsATPases Associated with Diverse Cellular ActivitiesCell LineCell NucleusDNA-Binding ProteinsHumansLIM Domain ProteinsMediator ComplexMicePromoter Regions, GeneticProteasome Endopeptidase ComplexProtein MultimerizationProtein Structure, QuaternaryProtein TransportReceptors, GlucocorticoidAdaptor Proteins, Signal TransducingATPases Associated with Diverse Cellular ActivitiesDNA-Binding ProteinsLIM Domain ProteinsMediator ComplexProteasome Endopeptidase ComplexPSMC5 protein, humanReceptors, GlucocorticoidTHRAP3 protein, humanTranscription Factor AP-1Transcription Factors

Identifiers

PMID24819052
PMCPMC4018362
OpenAlexW2140912563

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.