Evidence map›Paper›PMID 24817979›Full record

ArticleInternational journal of clinical and experimental pathology2014

Coexistent loss of INI1 and BRG1 expression in a rhabdoid renal cell carcinoma (RCC): implications for a possible role of SWI/SNF complex in the pathogenesis of RCC.

Qiu Rao, Qiu-Yuan Xia, Qin Shen, Shan-Shan Shi, Pin Tu, Qun-Li Shi, Xiao-Jun Zhou

Open access · greenAbstract readCase Reports
In one paragraph

Article in International journal of clinical and experimental pathology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. New developments in existing WHO entities and evolving molecular concepts: The Genitourinary Pathology Society (GUPS) update on renal neoplasia.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2021
    Guideline
  2. Article
  3. Genistein Represses HOTAIR/Chromatin Remodeling Pathways to Suppress Kidney Cancer.Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology · 2020
    Article
  4. Review
  5. FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
  6. Article
  7. Review
  8. Targeting epigenetics using synthetic lethality in precision medicine.Cellular and molecular life sciences : CMLS · 2018
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Loss of switch/sucrose non-fermenting complex protein expression is associated with dedifferentiation in endometrial carcinomas.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2016
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Qiu RaoDepartment of Pathology, Nanjing Jinling Hospital, Nanjing University School of Medicine Nanjing, China.
Qiu-Yuan XiaDepartment of Pathology, Nanjing Jinling Hospital, Nanjing University School of Medicine Nanjing, China.
Qin ShenDepartment of Pathology, Nanjing Jinling Hospital, Nanjing University School of Medicine Nanjing, China.
Shan-Shan ShiDepartment of Pathology, Nanjing Jinling Hospital, Nanjing University School of Medicine Nanjing, China.
Pin TuDepartment of Pathology, Nanjing Jinling Hospital, Nanjing University School of Medicine Nanjing, China.
Qun-Li ShiDepartment of Pathology, Nanjing Jinling Hospital, Nanjing University School of Medicine Nanjing, China.
Xiao-Jun ZhouDepartment of Pathology, Nanjing Jinling Hospital, Nanjing University School of Medicine Nanjing, China.
Nanjing General Hospital of Nanjing Military Command · CNNanjing University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, we analyzed the immunohistochemical and molecular profiles of an unusual RCC showed coexistent absence of INI1 and BRG1 expression, rhabdoid morphology, and poor prognosis. Histologically, the tumor had rhabdoid features, which were demonstrated by large round to polygonal cells with eccentric nuclei, prominent nucleoli, and eosinophilic cytoplasm varying from abundant to scanty. Immunohistochemically, the tumor were positive for BRM, PBRM1, ARID1A, CD10, CKpan, Vimentin, carbonic anhydrase IX (CA-IX), and P504S (AMACR) but negative for INI1, BRG1, HMB45, melan A, CK7, CD117, Ksp-cadherin, TFEB, TFE3, and Cathepsin K. We detected all three exons status of the VHL gene of the tumor and observed 1 somatic mutations in 1st exon. Chromosome 3p deletion, coupled with polysomy of chromosome 3 was also found. Based on these findings, it is further indicated that in some cases, rhabdoid RCC may arise from clear cell RCC. SWI/SNF chromatin remodeling complex may be an attractive candidate for being the "second hit" in RCCs and may play an important role during tumor progression. The role of SWI/SNF complex in rhabdoid RCC should be further studied on a larger number of cases.

Indexed as

AgedCarcinoma, Renal CellChromosomal Proteins, Non-HistoneDisease ProgressionDNA-Binding ProteinsDNA HelicasesFatal OutcomeGene Expression Regulation, NeoplasticHumansKidney NeoplasmsMaleNuclear ProteinsPrognosisSMARCB1 ProteinTranscription FactorsChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDNA HelicasesNuclear ProteinsSMARCA4 protein, humanSMARCB1 ProteinSMARCB1 protein, humanSWI-SNF-B chromatin-remodeling complexTranscription FactorsBRG1immunohistochemistryINI1renal cell carcinomarhabdoidSMARCA4SMARCB1SWI/SNF complex

Identifiers

PMID24817979
PMCPMC4014263
OpenAlexW2167720631

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.