Evidence map›Paper›PMID 24817947›Full record

ArticleInternational journal of clinical and experimental pathology2014

DNA microarray reveals ZNF195 and SBF1 are potential biomarkers for gemcitabine sensitivity in head and neck squamous cell carcinoma cell lines.

Min-Hui Zhu, Shun-Long Ji, Cai-Yun Zhang, Long Cui, Lei Xiong, Hong-Liang Zheng

Open access · greenAbstract read
In one paragraph

Article in International journal of clinical and experimental pathology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact, top 98% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Min-Hui ZhuDepartment of Otorhinolaryngology-Head and Neck Surgery, Changhai Hospital, Second Military Medical University Shanghai, China.
Shun-Long JiDepartment of Otorhinolaryngology-Head and Neck Surgery, Changhai Hospital, Second Military Medical University Shanghai, China.
Cai-Yun ZhangDepartment of Otorhinolaryngology-Head and Neck Surgery, Changhai Hospital, Second Military Medical University Shanghai, China.
Long CuiDepartment of Otorhinolaryngology-Head and Neck Surgery, Changhai Hospital, Second Military Medical University Shanghai, China.
Lei XiongDepartment of Otorhinolaryngology-Head and Neck Surgery, Changhai Hospital, Second Military Medical University Shanghai, China.
Hong-Liang ZhengDepartment of Otorhinolaryngology-Head and Neck Surgery, Changhai Hospital, Second Military Medical University Shanghai, China.
Second Military Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gemcitabine is a potential chemotherapy drug for treatment of head and neck squamous cell carcinoma (HNSCC), however, the poor or partial response of HNSCC patients to gemcitabine demonstrated the urgent need for gemcitabine biomarkers to improve the therapy. In present work, 10 HNSCC cell lines were employed to figure out the biomarkers for gemcitabine sensitivity. The sensitivities of these 10 cell lines to gemcitabine and the basal expression of these cell lines was investigated, the correlation between gemcitabine response (IC50 dose) and gene expression was investigated by Pearson correlation and FDR estimation. The top seven positive genes responsible for gemcitabine sensitivity were validated by qPCR in these 10 HNSCC cell lines, while only two genes (SBF1 and ZNF195) were expression-correlated to gemcitabine response. Furthermore, ZNF195 expression was closely associated with gemcitabine sensitivity in the subsequent independent validation in cell lines from various types of cancer. Our work might provide potential biomarkers for gemcitabine sensitivity in HNSCC and various type of cancer.

Indexed as

Drug Resistance, NeoplasmAntineoplastic AgentsBiomarkers, TumorCarcinoma, Squamous CellCell Line, TumorDeoxycytidineDNA-Binding ProteinsDose-Response Relationship, DrugGemcitabineHead and Neck NeoplasmsHumansIntracellular Signaling Peptides and ProteinsKruppel-Like Transcription FactorsOligonucleotide Array Sequence AnalysisTreatment OutcomeZinc FingersAntineoplastic AgentsBiomarkers, TumorDeoxycytidineDNA-Binding ProteinsGemcitabineIntracellular Signaling Peptides and ProteinsKruppel-Like Transcription FactorsSBF1 protein, humanZNF195 protein, humanDNA microarraygemcitabineHead and neck squamous cell carcinomaSBF1ZNF195

Identifiers

PMID24817947
PMCPMC4014231
OpenAlexW1026876498

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.