Evidence map›Paper›PMID 24817120›Full record

ArticleThe Journal of biological chemistry2014

Casein kinase II regulation of the Hot1 transcription factor promotes stochastic gene expression.

Laura T Burns, Susan R Wente

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Laura T BurnsFrom the Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, Tennessee 37232.
Susan R WenteFrom the Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, Tennessee 37232 susan.wente@vanderbilt.edu.
Vanderbilt University · US

Funding

BIOCHEMICAL &CHEMICAL TRAINING FOR CANCER RESEARCHT32CA009582 · NCI · VANDERBILT UNIVERSITY · PI David K Cortez · 1987 to 2026
$8.8M
Molecular Analysis of Nuclear Pore Complex FunctionR37GM051219 · NIGMS · VANDERBILT UNIVERSITY · PI WENTE, SUSAN R. · 2010 to 2019
$5.6M
MOLECULAR ANALYSIS OF NUCLEAR PORE COMPLEX FUNCTIONR01GM051219 · NIGMS · WASHINGTON UNIVERSITY · PI WENTE, SUSAN R. · 1994 to 2009
$4.2M
LTQ Orbitrap XL ETD Hybrid FT High Resolution Mass SpectrometerS10RR027714 · NCRR · VANDERBILT UNIVERSITY · PI HACHEY, DAVID L · 2010 to 2010
$479k
NCI NIH HHS T32 CA009582NCI NIH HHS T32CA009582NCRR NIH HHS 1S10RR027714NCRR NIH HHS S10 RR027714NIGMS NIH HHS R01 GM051219NIGMS NIH HHS R37 GM051219NIGMS NIH HHS R37GM051219
6 · The paper itself

Abstract

In Saccharomyces cerevisiae, Hog1 MAPK is activated and induces a transcriptional program in response to hyperosmotic stress. Several Hog1-responsive genes exhibit stochastic transcription, resulting in cell-to-cell variability in mRNA and protein levels. However, the mechanisms governing stochastic gene activity are not fully defined. Here we uncover a novel role for casein kinase II (CK2) in the cellular response to hyperosmotic stress. CK2 interacts with and phosphorylates the Hot1 transcription factor; however, Hot1 phosphorylation is not sufficient for controlling the stochastic response. The CK2 protein itself is required to negatively regulate mRNA expression of Hot1-responsive genes and Hot1 enrichment at target promoters. Single-cell gene expression analysis reveals altered activation of Hot1-targeted STL1 in ck2 mutants, resulting in a bimodal to unimodal shift in expression. Together, this work reveals a novel CK2 function during the hyperosmotic stress response that promotes cell-to-cell variability in gene expression.

Indexed as

Casein Kinase IIGene Expression Regulation, FungalMembrane Transport ProteinsMitogen-Activated Protein KinasesMutationOsmotic PressurePhosphorylationSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsStochastic ProcessesTranscription FactorsCasein Kinase IIHOG1 protein, S cerevisiaeHOT1 protein, S cerevisiaeMembrane Transport ProteinsMitogen-Activated Protein KinasesSaccharomyces cerevisiae ProteinsSTL1 protein, S cerevisiaeTranscription FactorsGene ExpressionMitogen-activated Protein Kinase (MAPK)Protein PhosphorylationStress ResponseTranscription Factor

Identifiers

PMID24817120
PMCPMC4067201
OpenAlexW1969068095

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.