Evidence map›Paper›PMID 24817095›Full record

ArticleAnnals of botany2014

Dinitrogen fixation associated with shoots of aquatic carnivorous plants: is it ecologically important?

Dagmara Sirová, Jiří Santrůček, Lubomír Adamec, Jiří Bárta, Jakub Borovec, Jiří Pech, Sarah M Owens, Hana Santrůčková, Rudi Schäufele, Helena Storchová and 1 more

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Annals of botany, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. CarnivorousApplied and environmental microbiology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 3 countries.

Dagmara SirováDepartment of Ecosystem Biology, Department of Experimental Plant Biology, Faculty of Science, University of South Bohemia, Branišovská 31, CZ-37005 České Budějovice, Czech Republic dagmara_sirova@hotmail.com.
Jiří SantrůčekDepartment of Ecosystem Biology, Department of Experimental Plant Biology, Faculty of Science, University of South Bohemia, Branišovská 31, CZ-37005 České Budějovice, Czech Republic Institute of Plant Molecular Biology, Biology Centre AS CR, Branišovská 31, CZ-37005 České Budějovice, Czech Republic.
Lubomír AdamecSection of Plant Ecology, Institute of Botany AS CR, Dukelská 135, CZ-37982 Třeboň, Czech Republic.
Jiří BártaDepartment of Ecosystem Biology, Department of Experimental Plant Biology, Faculty of Science, University of South Bohemia, Branišovská 31, CZ-37005 České Budějovice, Czech Republic.
Jakub BorovecInstitute of Hydrobiology, Biology Centre AS CR, Na Sádkách 7, CZ-37005 České Budějovice, Czech Republic.
Jiří PechInstitute of Applied Informatics, Faculty of Science, University of South Bohemia, Branišovská 31, CZ-37005 České Budějovice, Czech Republic.
Sarah M OwensInstitute of Genomics and Systems Biology, Argonne National Laboratory, Argonne, and Computation Institute, University of Chicago, Chicago, IL, USA.
Hana SantrůčkováDepartment of Ecosystem Biology, Department of Experimental Plant Biology, Faculty of Science, University of South Bohemia, Branišovská 31, CZ-37005 České Budějovice, Czech Republic.
Rudi SchäufeleDepartment of Grassland Study, Technical University Munich, Alte Akademie 12, Freising-Weihenstephan, Germany.
Helena StorchováInstitute of Experimental Botany AS CR, Rozvojová 263, CZ-16502 Prague 6-Lysolaje, Czech Republic.
Jaroslav VrbaDepartment of Ecosystem Biology, Department of Experimental Plant Biology, Faculty of Science, University of South Bohemia, Branišovská 31, CZ-37005 České Budějovice, Czech Republic Institute of Hydrobiology, Biology Centre AS CR, Na Sádkách 7, CZ-37005 České Budějovice, Czech Republic.
University of South Bohemia in České Budějovice · CZInstitute of Hydrobiology, Biology Centre, Academy of Sciences of the Czech Republic · CZCzech Academy of Sciences, Institute of Botany · CZCzech Academy of Sciences, Institute of Experimental Botany · CZInstitute of Plant Molecular Biology · CZTechnical University of Munich · DEUniversity of Chicago · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsRootless carnivorous plants of the genus Utricularia are important components of many standing waters worldwide, as well as suitable model organisms for studying plant-microbe interactions. In this study, an investigation was made of the importance of microbial dinitrogen (N2) fixation in the N acquisition of four aquatic Utricularia species and another aquatic carnivorous plant, Aldrovanda vesiculosa.

methods16S rRNA amplicon sequencing was used to assess the presence of micro-organisms with known ability to fix N2. Next-generation sequencing provided information on the expression of N2 fixation-associated genes. N2 fixation rates were measured following (15)N2-labelling and were used to calculate the plant assimilation rate of microbially fixed N2. KEY

resultsUtricularia traps were confirmed as primary sites of N2 fixation, with up to 16 % of the plant-associated microbial community consisting of bacteria capable of fixing N2. Of these, rhizobia were the most abundant group. Nitrogen fixation rates increased with increasing shoot age, but never exceeded 1·3 μmol N g(-1) d. mass d(-1). Plant assimilation rates of fixed N2 were detectable and significant, but this fraction formed less than 1 % of daily plant N gain. Although trap fluid provides conditions favourable for microbial N2 fixation, levels of nif gene transcription comprised <0·01 % of the total prokaryotic transcripts.

conclusionsIt is hypothesized that the reason for limited N2 fixation in aquatic Utricularia, despite the large potential capacity, is the high concentration of NH4-N (2·0-4·3 mg L(-1)) in the trap fluid. Resulting from fast turnover of organic detritus, it probably inhibits N2 fixation in most of the microorganisms present. Nitrogen fixation is not expected to contribute significantly to N nutrition of aquatic carnivorous plants under their typical growth conditions; however, on an annual basis the plant-microbe system can supply nitrogen in the order of hundreds of mg m(-2) into the nutrient-limited littoral zone, where it may thus represent an important N source.

Indexed as

Nitrogen FixationAmmonium CompoundsBacteriaBase SequenceDroseraceaeEcologyEcosystemMagnoliopsidaMolecular Sequence DataNitrogenNitrogen IsotopesPlant ShootsRNA, BacterialRNA, Ribosomal, 16SSequence Analysis, RNAWaterAmmonium CompoundsNitrogenNitrogen IsotopesRNA, BacterialRNA, Ribosomal, 16SWater15N2 labellingAldrovanda vesiculosaaquatic carnivorous plantsdaily nitrogen gainnitrogen fixationN nutritionperiphytontrapsU. australisU. intermediaU. reflexaUtricularia vulgaris

Identifiers

PMID24817095
PMCPMC4071093
OpenAlexW2145308776

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.