Evidence map›Paper›PMID 24816892›Full record

ArticlePloS one2014

OTX2 duplication is implicated in hemifacial microsomia.

Dina Zielinski, Barak Markus, Mona Sheikh, Melissa Gymrek, Clement Chu, Marta Zaks, Balaji Srinivasan, Jodi D Hoffman, Dror Aizenbud, Yaniv Erlich

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 52 citations in OpenAlex.

  1. Pooled it
  2. Familial Oculoauriculovertebral Spectrum: A Genomic Investigation of Autosomal Dominant Inheritance.The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association · 2026
    Article
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  4. Splicing Defects and Cell Death CauseJournal of dental research · 2025
    Article
  5. Article
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  7. Article
  8. Genes · 2023
    Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Haploinsufficiency ofMolecular cytogenetics · 2017
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Dina ZielinskiWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, United States of America.
Barak MarkusWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, United States of America.
Mona SheikhWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, United States of America.
Melissa GymrekWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, United States of America; Harvard-MIT Division of Health Sciences and Technology, MIT, Cambridge, Massachusetts, United States of America; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America; Department of Molecular Biology and Diabetes Unit, Massachusetts General Hospital, Boston, Massachusetts, United States of America.
Clement ChuCounsyl, South San Francisco, California, United States of America.
Marta ZaksRambam Health Care Campus, Haifa, Israel.
Balaji SrinivasanCounsyl, South San Francisco, California, United States of America.
Jodi D HoffmanDivision of Genetics, Tufts Medical Center, Boston, Massachusetts, United States of America.
Dror AizenbudRambam Health Care Campus, Haifa, Israel.
Yaniv ErlichWhitehead Institute for Biomedical Research, Cambridge, Massachusetts, United States of America.
Whitehead Institute for Biomedical Research · USRambam Health Care Campus · ILBroad Institute · USTufts Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hemifacial microsomia (HFM) is the second most common facial anomaly after cleft lip and palate. The phenotype is highly variable and most cases are sporadic. We investigated the disorder in a large pedigree with five affected individuals spanning eight meioses. Whole-exome sequencing results indicated the absence of a pathogenic coding point mutation. A genome-wide survey of segmental variations identified a 1.3 Mb duplication of chromosome 14q22.3 in all affected individuals that was absent in more than 1000 chromosomes of ethnically matched controls. The duplication was absent in seven additional sporadic HFM cases, which is consistent with the known heterogeneity of the disorder. To find the critical gene in the duplicated region, we analyzed signatures of human craniofacial disease networks, mouse expression data, and predictions of dosage sensitivity. All of these approaches implicated OTX2 as the most likely causal gene. Moreover, OTX2 is a known oncogenic driver in medulloblastoma, a condition that was diagnosed in the proband during the course of the study. Our findings suggest a role for OTX2 dosage sensitivity in human craniofacial development and raise the possibility of a shared etiology between a subtype of hemifacial microsomia and medulloblastoma.

Indexed as

Gene DuplicationAnimalsChromosome DuplicationChromosomes, Human, Pair 14DNA Copy Number VariationsExonsFemaleGoldenhar SyndromeHumansMaleMiceOtx Transcription FactorsOTX2 protein, humanOtx Transcription Factors

Identifiers

PMID24816892
PMCPMC4016008
OpenAlexW2097735202

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.