Evidence map›Paper›PMID 24816681›Full record

ArticleDrug metabolism and disposition: the biological fate of chemicals2014

The revised human liver cytochrome P450 "Pie": absolute protein quantification of CYP4F and CYP3A enzymes using targeted quantitative proteomics.

Scott Michaels, Michael Zhuo Wang

Open access · bronzeAbstract read
In one paragraph

Article in Drug metabolism and disposition: the biological fate of chemicals, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
6.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 93 citations in OpenAlex.

  1. Article
  2. Article
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  5. Article
  6. Review
  7. Age-Dependent Changes in Cytochrome P450 Abundance and Composition in Human Liver.Drug metabolism and disposition: the biological fate of chemicals · 2024
    Article
  8. PharmVar GeneFocus: CYP4F2.Clinical pharmacology and therapeutics · 2024
    Review
  9. The desert woodrat (Neotoma lepida) induces a diversity of biotransformation genes in response to creosote bush resin.Comparative biochemistry and physiology. Toxicology & pharmacology : CBP · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Protein Abundance of Drug Metabolizing Enzymes in Human Hepatitis C Livers.International journal of molecular sciences · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Expression of cytochrome P450 isozyme transcripts and activities in human livers.Xenobiotica; the fate of foreign compounds in biological systems · 2021
    Article
  20. The role of cytochrome P450 (CYP) enzymes in hyperoxic lung injury.Expert opinion on drug metabolism & toxicology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Scott MichaelsDepartment of Pharmaceutical Chemistry, School of Pharmacy, University of Kansas, Lawrence, Kansas (M.Z.W., S.M.); Wolfe Laboratories, Inc., Watertown, Massachusetts (S.M.).
Michael Zhuo WangDepartment of Pharmaceutical Chemistry, School of Pharmacy, University of Kansas, Lawrence, Kansas (M.Z.W., S.M.); Wolfe Laboratories, Inc., Watertown, Massachusetts (S.M.) michael.wang@ku.edu.
University of Kansas · US

Funding

Human Cytochrome P450 4F Enzymes and Drug InteractionsR01GM089994 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI WANG, ZHUO MICHAEL · 2010 to 2014
$1.4M
NIGMS NIH HHS R01 GM089994
6 · The paper itself

Abstract

The CYP4F subfamily of enzymes has been identified recently to be involved in the metabolism of endogenous compounds (arachidonic acid and leukotriene B4), nutrients (vitamins K1 and E), and xenobiotics (pafuramidine and fingolimod). CYP4F2 and CYP4F3B are reported to be expressed in the human liver. However, absolute concentrations of these enzymes in human liver microsomes (HLMs) and their interindividual variability have yet to be determined because of the lack of specific antibodies. Here, an liquid chromatography with tandem mass spectrometry (LC-MS/MS)-based targeted quantitative proteomic approach was employed to determine the absolute protein concentrations of CYP4F2 and CYP4F3B compared with CYP3A in two panels of HLMs (n = 31). As a result, the human hepatic cytochrome P450 (P450) "pie" has been revised to include the contribution of CYP4F enzymes, which amounts to 15% of the total hepatic cytochrome P450 enzymes. CYP4F3B displayed low interindividual variability (3.3-fold) in the HLM panels whereas CYP4F2 displayed large variability (21-fold). However, CYP4F2 variability decreased to 3.4-fold if the two donors with the lowest expression were excluded. In contrast, CYP3A exhibited 29-fold interindividual variability in the same HLM panels. The proposed marker reaction for CYP4F enzymes pafuramidine/DB289 M1 formation did not correlate with CYP4F protein content, suggesting alternate metabolic pathways for DB289 M1 formation in HLMs. In conclusion, CYP4F enzymes are highly expressed in the human liver and their physiologic and pharmacologic roles warrant further investigation.

Indexed as

AdolescentAdultAgedChildChromatography, LiquidCytochrome P-450 CYP3ACytochrome P-450 Enzyme SystemFemaleHumansLiverMaleMicrosomes, LiverMiddle AgedProteomeProteomicsTandem Mass SpectrometryCYP3A protein, humanCytochrome P-450 CYP3ACytochrome P-450 Enzyme SystemProteome

Identifiers

PMID24816681
PMCPMC4109210
OpenAlexW2137472574

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.