Evidence map›Paper›PMID 24816608›Full record

ArticleJournal of bacteriology2014

The Rip1 protease of Mycobacterium tuberculosis controls the SigD regulon.

Jessica S Schneider, Joseph G Sklar, Michael S Glickman

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Review
  3. An unusual genetic switch controlsbioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. The role of transcriptional regulators in metal ion homeostasis ofFrontiers in cellular and infection microbiology · 2024
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Selectivity among Anti-σ Factors byJournal of bacteriology · 2019
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jessica S SchneiderImmunology Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA Program in Immunology and Microbial Pathogenesis, Weill Cornell Graduate School, New York, New York, USA.
Joseph G SklarImmunology Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Michael S GlickmanImmunology Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA Division of Infectious Diseases, Memorial Sloan Kettering Cancer Center, New York, New York, USA Program in Immunology and Microbial Pathogenesis, Weill Cornell Graduate School, New York, New York, USA glickmam@mskcc.org.
Memorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
IMMUNOLOGY RESEARCH TRAINING PROGRAMT32AI007621 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI CESARMAN, ETHEL · 1999 to 2014
$3.4M
Molecular Analysis of the Rip1 Virulence Pathway of M. tuberculosisR01AI080628 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI GLICKMAN, MICHAEL S · 2009 to 2010
$942k
NCI NIH HHS P30 CA008748NIAID NIH HHS R01 AI080628NIAID NIH HHS T32 AI007621
6 · The paper itself

Abstract

Regulated intramembrane proteolysis of membrane-embedded substrates by site-2 proteases (S2Ps) is a widespread mechanism of transmembrane signal transduction in bacteria and bacterial pathogens. We previously demonstrated that the Mycobacterium tuberculosis S2P Rip1 is required for full virulence in the mouse model of infection. Rip1 controls transcription in part through proteolysis of three transmembrane anti-sigma factors, anti-SigK, -L, and -M, but there are also Rip1-dependent, SigKLM-independent pathways. To determine the contribution of the sigma factors K, L, and M to the Δrip1 attenuation phenotype, we constructed an M. tuberculosis ΔsigKΔ sigL ΔsigM mutant and found that this strain fails to recapitulate the marked attenuation of Δrip1 in mice. In a search for additional pathways controlled by Rip1, we demonstrated that the SigD regulon is positively regulated by the Rip1 pathway. Rip1 cleavage of transmembrane anti-SigD is required for expression of SigD target genes. In the absence of Rip1, proteolytic maturation of RsdA is impaired. These findings identify RsdA/SigD as a fourth arm of the branched pathway controlled by Rip1 in M. tuberculosis.

Indexed as

RegulonAnimalsBacterial ProteinsGene Expression Regulation, BacterialMiceMutationMycobacterium tuberculosisPeptide HydrolasesSigma FactorBacterial ProteinsPeptide HydrolasesSigma Factor

Identifiers

PMID24816608
PMCPMC4097585
OpenAlexW2036143397

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.