Evidence map›Paper›PMID 24816294›Full record

ArticleFree radical biology & medicine2014

In vivo detection of a novel endogenous etheno-DNA adduct derived from arachidonic acid and the effects of antioxidants on its formation.

Ying Fu, Raghu G Nath, Marcin Dyba, Idalia M Cruz, Sharanya R Pondicherry, Aileen Fernandez, Casey L Schultz, Peiying Yang, Jishen Pan, Dhimant Desai and 5 more

Open access · greenAbstract read
In one paragraph

Article in Free radical biology & medicine, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  4. Animal models of Wilson disease.Journal of neurochemistry · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Ying Fu *Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, District of Columbia 20057.
Raghu G Nath *Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, District of Columbia 20057.
Marcin Dyba *Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, District of Columbia 20057.
Idalia M CruzDepartment of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, District of Columbia 20057.
Sharanya R PondicherryDepartment of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, District of Columbia 20057.
Aileen FernandezDepartment of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, District of Columbia 20057.
Casey L SchultzDepartment of Experimental Therapeutics, University of Texas, MD Anderson Cancer Center, Houston, Texas 77054.
Peiying YangDepartment of Experimental Therapeutics, University of Texas, MD Anderson Cancer Center, Houston, Texas 77054.
Jishen PanDepartment of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, District of Columbia 20057.
Dhimant DesaiDepartment of Pharmacology, Penn State College of Medicine, Hershey, Pennsylvania 17033.
Jacek KrzeminskiDepartment of Pharmacology, Penn State College of Medicine, Hershey, Pennsylvania 17033.
Shantu AminDepartment of Pharmacology, Penn State College of Medicine, Hershey, Pennsylvania 17033.
Plamen P ChristovDepartment of Chemistry, Vanderbilt University, VU Station B 351822, Nashville, TN 37235.
Yukihiko HaraTea Solution, Hara Office Inc. Tokyo, Japan.
Fung-Lung ChungDepartment of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, District of Columbia 20057.
Georgetown University · USPennsylvania State University · USThe University of Texas MD Anderson Cancer Center · USVanderbilt University · US

Funding

Tissue Culture Shared ResourceP30CA051008 · NCI · GEORGETOWN UNIVERSITY · PI Louis M Weiner · 1990 to 2026
$71.5M
Lipid-Peroxidation Induced Cyclic Adducts in HepatocarcinogenesisR01CA134892 · NCI · GEORGETOWN UNIVERSITY · PI CHUNG, FUNG-LUNG · 2009 to 2013
$2.1M
NCI NIH HHS P30 CA051008NCI NIH HHS P30-CA051008NCI NIH HHS R01 CA134892NCI NIH HHS R01-CA-134892
6 · The paper itself

Abstract

Previous studies showed that 7-(1',2'-dihydroxyheptyl)-substituted etheno DNA adducts are products of reactions with the epoxide of (E)-4-hydroxy-2-nonenal, an oxidation product of ω-6 polyunsaturated fatty acids (PUFAs). In this work, we report the detection of 7-(1',2'-dihydroxyheptyl)-1,N(6)-ethenodeoxyadenosine (DHHedA) in rodent and human tissues by two independent methods: a (32)P-postlabeling/HPLC method and an isotope dilution liquid chromatography-electrospray ionization-tandem mass spectrometry method, demonstrating for the first time that DHHedA is a background DNA lesion in vivo. We showed that DHHedA can be formed upon incubation of arachidonic acid with deoxyadenosine, supporting the notion that ω-6 PUFAs are the endogenous source of DHHedA formation. Because cyclic adducts are derived from the oxidation of PUFAs, we subsequently examined the effects of antioxidants, α-lipoic acid, Polyphenon E, and vitamin E, on the formation of DHHedA and γ-hydroxy-1,N(2)-propanodeoxyguanosine (γ-OHPdG), a widely studied acrolein-derived adduct arising from oxidized PUFAs, in the livers of Long Evans Cinnamon (LEC) rats. LEC rats are afflicted with elevated lipid peroxidation and prone to the development of hepatocellular carcinomas. The results showed that although the survival of LEC rats was increased significantly by α-lipoic acid, none of the antioxidants inhibited the formation of DHHedA, and only Polyphenon E decreased the formation of γ-OHPdG. In contrast, vitamin E caused a significant increase in the formation of both γ-OHPdG and DHHedA in the livers of LEC rats.

Indexed as

AdenosineAnimalsAntioxidantsArachidonic AcidCatechinChromatography, LiquidDeoxyadenosinesDeoxyguanosineDNA AdductsEpoxy CompoundsHumansLiverRatsRats, Inbred F344Rats, Inbred LECRats, Sprague-Dawley7-(1',2'-dihydroxyheptyl)-1,N6-ethenodeoxyadenosineAdenosinealpha-hydroxypropanodeoxyguanosineAntioxidantsArachidonic AcidCatechinDeoxyadenosinesDeoxyguanosineDNA AdductsEpoxy Compoundspolyphenon EThioctic AcidVitamin EAntioxidantsDNA adductFree radicalsIsotope dilution liquid chromatography–electrospray ionization–tandem mass spectrometryω-6 polyunsaturated fatty acids

Identifiers

PMID24816294
PMCPMC4114339
OpenAlexW2055175046

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.