Evidence map›Paper›PMID 24814783›Full record

ArticleApplied and environmental microbiology2014

Going wireless: Fe(III) oxide reduction without pili by Geobacter sulfurreducens strain JS-1.

Jessica A Smith, Pier-Luc Tremblay, Pravin Malla Shrestha, Oona L Snoeyenbos-West, Ashley E Franks, Kelly P Nevin, Derek R Lovley

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 97 citations in OpenAlex.

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  13. Cytochromes in Extracellular Electron Transfer inApplied and environmental microbiology · 2021
    Review
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  17. Frontiers in microbiology · 2019
    Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jessica A SmithDepartment of Microbiology, University of Massachusetts, Amherst, Massachusetts, USA jsmith@microbio.umass.edu pitre@biosustain.dtu.dk.
Pier-Luc TremblayDepartment of Microbiology, University of Massachusetts, Amherst, Massachusetts, USA jsmith@microbio.umass.edu pitre@biosustain.dtu.dk.
Pravin Malla ShresthaDepartment of Microbiology, University of Massachusetts, Amherst, Massachusetts, USA.
Oona L Snoeyenbos-WestDepartment of Microbiology, University of Massachusetts, Amherst, Massachusetts, USA.
Ashley E FranksDepartment of Microbiology, University of Massachusetts, Amherst, Massachusetts, USA.
Kelly P NevinDepartment of Microbiology, University of Massachusetts, Amherst, Massachusetts, USA.
Derek R LovleyDepartment of Microbiology, University of Massachusetts, Amherst, Massachusetts, USA.
University of Massachusetts Amherst · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Previous studies have suggested that the conductive pili of Geobacter sulfurreducens are essential for extracellular electron transfer to Fe(III) oxides and for optimal long-range electron transport through current-producing biofilms. The KN400 strain of G. sulfurreducens reduces poorly crystalline Fe(III) oxide more rapidly than the more extensively studied DL-1 strain. Deletion of the gene encoding PilA, the structural pilin protein, in strain KN400 inhibited Fe(III) oxide reduction. However, low rates of Fe(III) reduction were detected after extended incubation (>30 days) in the presence of Fe(III) oxide. After seven consecutive transfers, the PilA-deficient strain adapted to reduce Fe(III) oxide as fast as the wild type. Microarray, whole-genome resequencing, proteomic, and gene deletion studies indicated that this adaptation was associated with the production of larger amounts of the c-type cytochrome PgcA, which was released into the culture medium. It is proposed that the extracellular cytochrome acts as an electron shuttle, promoting electron transfer from the outer cell surface to Fe(III) oxides. The adapted PilA-deficient strain competed well with the wild-type strain when both were grown together on Fe(III) oxide. However, when 50% of the culture medium was replaced with fresh medium every 3 days, the wild-type strain outcompeted the adapted strain. A possible explanation for this is that the necessity to produce additional PgcA, to replace the PgcA being continually removed, put the adapted strain at a competitive disadvantage, similar to the apparent selection against electron shuttle-producing Fe(III) reducers in many anaerobic soils and sediments. Despite increased extracellular cytochrome production, the adapted PilA-deficient strain produced low levels of current, consistent with the concept that long-range electron transport through G. sulfurreducens biofilms is more effective via pili.

Indexed as

Adaptation, PhysiologicalBiofilmsDNA, BacterialElectron TransportFerric CompoundsFimbriae, BacterialFimbriae ProteinsGene DeletionGeobacterOligonucleotide Array Sequence AnalysisProteomicsSequence Analysis, DNADNA, BacterialFerric Compoundsferric oxideFimbriae Proteins

Identifiers

PMID24814783
PMCPMC4068678
OpenAlexW1981107286

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.