Evidence map›Paper›PMID 24814672›Full record

ArticleNature chemical biology2014

Microbial glycan microarrays define key features of host-microbial interactions.

Sean R Stowell, Connie M Arthur, Ryan McBride, Oren Berger, Nahid Razi, Jamie Heimburg-Molinaro, Lilian C Rodrigues, Jean-Philippe Gourdine, Alexander J Noll, Stephan von Gunten and 4 more

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 142 papers.

0numbers the graph read from it
0cells of the map it votes in
142citing papers in PubMed
9.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

142 citing papers in PubMed, 219 citations in OpenAlex.

  1. Article
  2. Living Microbial Drugs.Chemistry (Weinheim an der Bergstrasse, Germany) · 2026
    Review
  3. Article
  4. Article
  5. Flow Cytometric Examination of Galectin Binding to Red Blood Cells.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  6. Article
  7. Use of Microbial Microarrays to Define Antibody Specificity.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. O-antigen polysaccharides inMicrobiology and molecular biology reviews : MMBR · 2025
    Review
  15. Article
  16. Defined Glycan Ligands for Detecting Rare l-Sugar-Binding Proteins.Journal of the American Chemical Society · 2025
    Article
  17. Article
  18. Profiling of Anti-glycan IgA and IgG in Oral Fluid Using a Glycan Microarray.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  19. Article
  20. Article

82 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 3 countries.

Sean R Stowell1] Department of Biochemistry and the Glycomics Center, Emory University School of Medicine, Atlanta, Georgia, USA. [2].
Connie M Arthur1] Department of Biochemistry and the Glycomics Center, Emory University School of Medicine, Atlanta, Georgia, USA. [2].
Ryan McBride1] Department of Cell and Molecular Biology, The Scripps Research Institute, La Jolla, California, USA. [2] Department of and Chemical Physiology, The Scripps Research Institute, La Jolla, California, USA. [3].
Oren Berger1] Department of Cell and Molecular Biology, The Scripps Research Institute, La Jolla, California, USA. [2] Department of and Chemical Physiology, The Scripps Research Institute, La Jolla, California, USA.
Nahid Razi1] Department of Cell and Molecular Biology, The Scripps Research Institute, La Jolla, California, USA. [2] Department of and Chemical Physiology, The Scripps Research Institute, La Jolla, California, USA.
Jamie Heimburg-MolinaroDepartment of Biochemistry and the Glycomics Center, Emory University School of Medicine, Atlanta, Georgia, USA.
Lilian C RodriguesDepartment of Biochemistry and the Glycomics Center, Emory University School of Medicine, Atlanta, Georgia, USA.
Jean-Philippe GourdineDepartment of Biochemistry and the Glycomics Center, Emory University School of Medicine, Atlanta, Georgia, USA.
Alexander J NollDepartment of Biochemistry and the Glycomics Center, Emory University School of Medicine, Atlanta, Georgia, USA.
Stephan von GuntenInstitute of Pharmacology, University of Bern, Bern, Switzerland.
David F SmithDepartment of Biochemistry and the Glycomics Center, Emory University School of Medicine, Atlanta, Georgia, USA.
Yuriy A KnirelN.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow, Russia.
James C Paulson1] Department of Cell and Molecular Biology, The Scripps Research Institute, La Jolla, California, USA. [2] Department of and Chemical Physiology, The Scripps Research Institute, La Jolla, California, USA.
Richard D CummingsDepartment of Biochemistry and the Glycomics Center, Emory University School of Medicine, Atlanta, Georgia, USA.
Emory University · USScripps Research Institute · USN.D. Zelinsky Institute of Organic Chemistry · RUUniversity of Bern · CH

Funding

Structural Basis of Immune Recognition of Glycosylated AntigensU54GM062116 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI SASISEKHARAN, RAM · 2001 to 2010
$80.3M
Protein-glycan Interactions in the Vascular SystemP01HL085607 · NHLBI · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI CUMMINGS, RICHARD D, MCEVER, RODGER PAUL · 2006 to 2015
$16.8M
Treating lung inflammation by targeting SiglecsP01HL107151 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI SCHNAAR, RONALD L · 2011 to 2017
$15.4M
REGULATION OF SIALOSIDE EXPRESSION IN LEUKOCYTESR01AI050143 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI PAULSON, JAMES C · 2003 to 2018
$7.0M
Overall Priority Score P41GM103694 · NIGMS · EMORY UNIVERSITY · PI CUMMINGS, RICHARD D · 2013 to 2018
$6.9M
Protein-Glycan Interaction Resource of the CFGR24GM098791 · NIGMS · EMORY UNIVERSITY · PI CUMMINGS, RICHARD D, PAULSON, JAMES C · 2011 to 2013
$2.6M
Training Grant in Transfusion Medicine (T32)T32HL069769 · NHLBI · EMORY UNIVERSITY · PI Una T O'Doherty, John D Roback · 2004 to 2026
$2.6M
NHLBI NIH HHS HL085607NHLBI NIH HHS P01 HL085607NHLBI NIH HHS P01 HL107151NHLBI NIH HHS P01HL107151NHLBI NIH HHS T32 HL069769NIAID NIH HHS R01 AI050143NIAID NIH HHS R01AI050143NIGMS NIH HHS P41 GM103694NIGMS NIH HHS P41GM103694NIGMS NIH HHS R24 GM098791NIGMS NIH HHS R24GM098791NIGMS NIH HHS U54 GM062116NIGMS NIH HHS U54GM62116
6 · The paper itself

Abstract

Genomic approaches continue to provide unprecedented insight into the microbiome, yet host immune interactions with diverse microbiota can be difficult to study. We therefore generated a microbial microarray containing defined antigens isolated from a broad range of microbial flora to examine adaptive and innate immunity. Serological studies with this microarray show that immunoglobulins from multiple mammalian species have unique patterns of reactivity, whereas exposure of animals to distinct microbes induces specific serological recognition. Although adaptive immunity exhibited plasticity toward microbial antigens, immunological tolerance limits reactivity toward self. We discovered that several innate immune galectins show specific recognition of microbes that express self-like antigens, leading to direct killing of a broad range of Gram-negative and Gram-positive microbes. Thus, host protection against microbes seems to represent a balance between adaptive and innate immunity to defend against evolving antigenic determinants while protecting against molecular mimicry.

Indexed as

Immunity, InnateAdaptive ImmunityAnimalsAntigens, BacterialBinding SitesCell SurvivalCHO CellsCricetinaeCricetulusFluorometryGalectinsGram-Negative BacteriaGram-Positive BacteriaHost-Pathogen InteractionsHumansImmunoglobulin GAntigens, BacterialGalectinsImmunoglobulin GImmunoglobulin MPolysaccharides

Identifiers

PMID24814672
PMCPMC4158828
OpenAlexW2046358537

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.