Evidence map›Paper›PMID 24813921›Full record

ArticleJournal of the American Chemical Society2014

Structure of the Neisserial outer membrane protein Opa₆₀: loop flexibility essential to receptor recognition and bacterial engulfment.

Daniel A Fox, Per Larsson, Ryan H Lo, Brett M Kroncke, Peter M Kasson, Linda Columbus

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Article
  3. Neutrophil CEACAMs and the Inflammatory Response toJournal of innate immunity · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Transferred-Rotational-Echo Double Resonance.The journal of physical chemistry. A · 2021
    Article
  14. Anti-Virulence Therapeutic Approaches forAntibiotics (Basel, Switzerland) · 2021
    Review
  15. Imaging Flow Cytometry Analysis of CEACAM Binding to Opa-Expressing Neisseria gonorrhoeae.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2020
    Article
  16. Epithelial Haven and Autophagy Breakout in Gonococci Infection.Frontiers in cell and developmental biology · 2020
    Review
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Daniel A FoxDepartment of Chemistry, University of Virginia , Charlottesville, Virginia 22904, United States.
Per Larsson
Ryan H Lo
Brett M Kroncke
Peter M Kasson
Linda Columbus
University of Virginia · US

Funding

Women's Oncology Program - WONP30CA044579 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI Jay William FOX · 1987 to 2026
$72.1M
Structure and dynamics of bacterial membrane protein - receptor interactionsR01GM087828 · NIGMS · UNIVERSITY OF VIRGINIA · PI COLUMBUS, LINDA M · 2009 to 2018
$2.7M
Understanding fusion peptide mutations in influenza hemagglutininR01GM098304 · NIGMS · UNIVERSITY OF VIRGINIA · PI KASSON, PETER M · 2012 to 2016
$1.7M
NCI NIH HHS P30 CA044579NIGMS NIH HHS R01 GM087828NIGMS NIH HHS R01GM087828NIGMS NIH HHS R01 GM098304NIGMS NIH HHS R01GM098304
6 · The paper itself

Abstract

The structure and dynamics of Opa proteins, which we report herein, are responsible for the receptor-mediated engulfment of Neisseria gonorrheae or Neisseria meningitidis by human cells and can offer deep understanding into the molecular recognition of pathogen-host receptor interactions. Such interactions are vital to understanding bacterial pathogenesis as well as the mechanism of foreign body entry to a human cell, which may provide insights for the development of targeted pharmaceutical delivery systems. The size and dynamics of the extracellular loops of Opa60 required a hybrid refinement approach wherein membrane and distance restraints were used to generate an initial NMR structural ensemble, which was then further refined using molecular dynamics in a DMPC bilayer. The resulting ensemble revealed that the extracellular loops, which bind host receptors, occupy compact conformations, interact with each other weakly, and are dynamic on the nanosecond time scale. We predict that this conformational sampling is critical for enabling diverse Opa loop sequences to engage a common set of receptors.

Indexed as

Bacterial Outer Membrane ProteinsDimyristoylphosphatidylcholineExtracellular SpaceForeign-Body ReactionHost-Pathogen InteractionsHumansLipid BilayersMolecular ConformationNanotechnologyNeisseria gonorrhoeaeNeisseria meningitidisBacterial Outer Membrane ProteinsDimyristoylphosphatidylcholineLipid Bilayers

Identifiers

PMID24813921
PMCPMC4105060
OpenAlexW2331160130

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.