Evidence map›Paper›PMID 24812625›Full record

ArticleBioMed research international2014

Detection of Newcastle disease virus minor genetic variants by modified single-stranded conformational polymorphism analysis.

Lukasz Rabalski, Krzysztof Smietanka, Zenon Minta, Boguslaw Szewczyk

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Zoonotic diseases from birds to humans in Vietnam: possible diseases and their associated risk factors.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2019
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Lukasz RabalskiDepartment of Recombinant Vaccines, Intercollegiate Faculty of Biotechnology, University of Gdansk, Medical University of Gdansk, Kladki 24, 80-822 Gdansk, Poland.
Krzysztof SmietankaThe National Veterinary Research Institute, Aleja Partyzantow 57, 24-100 Pulawy, Poland.
Zenon MintaThe National Veterinary Research Institute, Aleja Partyzantow 57, 24-100 Pulawy, Poland.ORCID 0000-0003-2667-0849
Boguslaw SzewczykDepartment of Recombinant Vaccines, Intercollegiate Faculty of Biotechnology, University of Gdansk, Medical University of Gdansk, Kladki 24, 80-822 Gdansk, Poland.ORCID 0000-0003-4957-4059
Gdańsk Medical University · PLNational Veterinary Research Institute · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Newcastle disease and Avian Influenza are considered to be the most dangerous fowl diseases which may cause huge economic losses. Newcastle disease is caused by the enveloped, and single-stranded RNA virus (NDV, APMV-1; belonging to Paramyxoviridae family), which can be further divided into sixteen different genotypes grouped into five pathotypes according to their pathogenicity. It has been reported that low pathogenic virus can greatly increase its pathogenicity even during a single passage. Additionally, due to the widespread use of live vaccines, a mixture of two or more different viruses in one sample can be detected. Hence, there is a great need for establishment of fast, inexpensive, sensitive, and relatively simple diagnostic method for multistrain and quasispecies detection of NDV infection. In this paper we describe a diagnostic method based on RT-PCR followed by a modified version of single-stranded conformational polymorphism analysis using short DNA fragments of gene encoding viral F protein. The method allows for rapid diagnosis of genetic variant emerging from previously stable population which may prevent the spread of the pathogenic viral variant.

Indexed as

AnimalsDNA, ViralNewcastle DiseaseNewcastle disease virusNucleic Acid ConformationPolymorphism, Single-Stranded ConformationalReproducibility of ResultsReverse Transcriptase Polymerase Chain ReactionTemplates, GeneticVirus SheddingDNA, Viral

Identifiers

PMID24812625
PMCPMC4000945
OpenAlexW2036710506

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.