Evidence map›Paper›PMID 24812251›Full record

ArticleAnnals of botany2014

New insights into pioneer root xylem development: evidence obtained from Populus trichocarpa plants grown under field conditions.

Agnieszka Bagniewska-Zadworna, Magdalena Arasimowicz-Jelonek, Dariusz J Smoliński, Agnieszka Stelmasik

Open access · bronzeAbstract read
In one paragraph

Article in Annals of botany, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Autophagy in the Lifetime of Plants: From Seed to Seed.International journal of molecular sciences · 2022
    Review
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  11. Article
  12. Article
  13. Protein S-nitrosylation in programmed cell death in plants.Cellular and molecular life sciences : CMLS · 2019
    Review
  14. Article
  15. Review
  16. Review
  17. Transcriptomic Response to Nitric Oxide Treatment in Larix olgensis Henry.International journal of molecular sciences · 2015
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Agnieszka Bagniewska-ZadwornaDepartment of General Botany agabag@amu.edu.pl.
Magdalena Arasimowicz-JelonekDepartment of Plant Ecophysiology, Institute of Experimental Biology, Faculty of Biology, Adam Mickiewicz University, Umultowska 89, 61-614 Poznań, Poland.
Dariusz J SmolińskiDepartment of Cell Biology, Institute of General and Molecular Biology, Nicolaus Copernicus University, Lwowska 1, 87-100 Toruń, Poland.
Agnieszka StelmasikDepartment of General Botany.
Adam Mickiewicz University in Poznań · PLNicolaus Copernicus University · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsEffective programmed xylogenesis is critical to the structural framework of the plant root system and its central role in the acquisition and long-distance transport of water and nutrients. The process of xylem differentiation in pioneer roots under field conditions is poorly understood. In this study it is hypothesized that xylogenesis, an example of developmental programmed cell death (PCD), in the roots of woody plants demonstrates a clearly defined sequence of events resulting in cell death. A comprehensive analysis was therefore undertaken to identify the stages of xylogenesis in pioneer roots from procambial cells to fully functional vessels with lignified cell walls and secondary cell wall thickenings.

methodsXylem differentiation was monitored in the pioneer roots of Populus trichocarpa at the cytological level using rhizotrons under field conditions. Detection and localization of the signalling molecule nitric oxide (NO) and hydrogen peroxide (H2O2) was undertaken and a detailed examination of nuclear changes during xylogenesis was conducted. In addition, analyses of the expression of genes involved in secondary cell wall synthesis were performed in situ. KEY

resultsThe primary event in initially differentiating tracheary elements (TEs) was a burst of NO in thin-walled cells, followed by H2O2 synthesis and the appearance of TUNEL (terminal deoxynucleotidyl transferase-mediated dUTP nick end labelling)-positive nuclei. The first changes in nuclear structure were observed in the early stages of xylogenesis of pioneer roots, prior to lignification; however, the nucleus was detectable under transmission electron microscopy in differentiating cells until the stage at which vacuole integrity was maintained, indicating that their degradation was slow and prolonged. The subsequent sequence of events involved secondary cell wall formation and autophagy. Potential gene markers from the cinnamyl alcohol dehydrogenase (CAD) gene family that were related to secondary wall synthesis were associated with primary xylogenesis, showing clear expression in cells that undergo differentiation into TEs and in the thin-walled cells adjacent to the xylem pole.

conclusionsThe early events of TE formation during pioneer root development are described, together with the timing of xylogenesis from signalling via NO, through secondary cell wall synthesis and autophagy events that are initiated long before lignification. This is the first work describing experiments conducted in planta on roots under field conditions demonstrating that the process of xylogenesis in vivo might be gradual and complex.

Indexed as

Signal TransductionAlcohol OxidoreductasesBiological TransportGene ExpressionHydrogen PeroxideIn Situ Hybridization, FluorescenceIn Situ Nick-End LabelingMicroscopy, Electron, TransmissionMicroscopy, FluorescenceNitric OxidePlant ProteinsPlant RootsPopulusXylemAlcohol Oxidoreductasescinnamyl alcohol dehydrogenaseHydrogen PeroxideNitric OxidePlant Proteinsblack cottonwoodcell wall synthesisnitric oxide signallingPCDpioneer root developmentPopulus trichocarpaprogrammed cell deathtracheary elementsxylogenesis

Identifiers

PMID24812251
PMCPMC4030819
OpenAlexW2117932136

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.