Evidence map›Paper›PMID 24811321›Full record

ArticleViruses2014

A novel adenovirus in Chinstrap penguins (Pygoscelis antarctica) in Antarctica.

Sook-Young Lee, Jeong-Hoon Kim, Yon Mi Park, Ok Sarah Shin, Hankyeom Kim, Han-Gu Choi, Jin-Won Song

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Sook-Young LeeDepartment of Microbiology, College of Medicine, Institute for Viral Diseases, Korea University, Seoul 136-705, Korea. sylee163@gmail.com.
Jeong-Hoon KimDivision of Life Sciences, Korea Polar Research Institute, Incheon 406-840, Korea. jhkim94@kopri.re.kr.
Yon Mi ParkDepartment of Microbiology, College of Medicine, Institute for Viral Diseases, Korea University, Seoul 136-705, Korea. suerte8422@hotmail.com.
Ok Sarah ShinDepartment of Biomedical Science, College of Medicine, Korea University, Seoul 136-705, Korea. oshin@korea.ac.kr.
Hankyeom KimDepartment of Pathology, College of Medicine, Korea University, Guro Hospital, Seoul 152-703, Korea. sswords@naver.com.
Han-Gu ChoiDivision of Life Sciences, Korea Polar Research Institute, Incheon 406-840, Korea. hchoi82@kopri.re.kr.
Jin-Won SongDepartment of Microbiology, College of Medicine, Institute for Viral Diseases, Korea University, Seoul 136-705, Korea. jwsong@korea.ac.kr.
Korea University · KRKorea Polar Research Institute · KRKorea University Medical Center · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adenoviruses (family Adenoviridae) infect various organ systems and cause diseases in a wide range of host species. In this study, we examined multiple tissues from Chinstrap penguins (Pygoscelis antarctica), collected in Antarctica during 2009 and 2010, for the presence of novel adenoviruses by PCR. Analysis of a 855-bp region of the hexon gene of a newly identified adenovirus, designated Chinstrap penguin adenovirus 1 (CSPAdV-1), showed nucleotide (amino acid) sequence identity of 71.8% (65.5%) with South Polar skua 1 (SPSAdV-1), 71% (70%) with raptor adenovirus 1 (RAdV-1), 71.4% (67.6%) with turkey adenovirus 3 (TAdV-3) and 61% (61.6%) with frog adenovirus 1 (FrAdV-1). Based on the genetic and phylogenetic analyses, CSPAdV-1 was classified as a member of the genus, Siadenovirus. Virus isolation attempts from kidney homogenates in the MDTC-RP19 (ATCC® CRL-8135™) cell line were unsuccessful. In conclusion, this study provides the first evidence of new adenovirus species in Antarctic penguins.

Indexed as

Adenoviridae InfectionsAnimalsAnimal StructuresAntarctic RegionsCluster AnalysisDNA, ViralMolecular Sequence DataPhylogenyPolymerase Chain ReactionSequence Analysis, DNASequence HomologySiadenovirusSpheniscidaeDNA, Viral

Identifiers

PMID24811321
PMCPMC4036538
OpenAlexW2066016871

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.