Evidence map›Paper›PMID 24810493›Full record

Trial reportOncotarget2014

Multiplex genomic profiling of non-small cell lung cancers from the LETS phase III trial of first-line S-1/carboplatin versus paclitaxel/carboplatin: results of a West Japan Oncology Group study.

Isamu Okamoto, Kazuko Sakai, Satoshi Morita, Hiroshige Yoshioka, Hiroyasu Kaneda, Koji Takeda, Tomonori Hirashima, Yoshihito Kogure, Tatsuo Kimura, Toshiaki Takahashi and 18 more

Open access · diamondAbstract readClinical Trial, Phase IIIMulticenter StudyRandomized Controlled Trial
In one paragraph

Trial report in Oncotarget, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. [Gene Fusions as Acquired Resistance Mechanisms of EGFR-TKI].Zhongguo fei ai za zhi = Chinese journal of lung cancer · 2020
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Testing for ROS1 in non-small cell lung cancer: a review with recommendations.Virchows Archiv : an international journal of pathology · 2016
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 20 institutions in 1 country.

Isamu OkamotoCenter for Clinical and Translational Research, Kyushu University Hospital, Fukuoka, Japan.
Kazuko Sakai
Satoshi Morita
Hiroshige Yoshioka
Hiroyasu Kaneda
Koji Takeda
Tomonori Hirashima
Yoshihito Kogure
Tatsuo Kimura
Toshiaki Takahashi
Shinji Atagi
Takashi Seto
Toshiyuki Sawa
Masashi Yamamoto
Miyako Satouchi
Motoyasu Okuno
Seisuke Nagase
Koichi Takayama
Keisuke Tomii
Tadashi Maeda
Satoshi Oizumi
Shinji Fujii
Yusaku Akashi
Kazumi Nishino
Noriyuki Ebi
Kazuhiko Nakagawa
Yoichi Nakanishi
Kazuto Nishio
Kindai University · JPKyushu University Hospital · JPAichi Cancer Center · JPAso Iizuka Hospital · JPGifu Municipal Hospital · JPHokkaido University · JPHyogo Prefectural Cancer Center · JPKobe City Medical Center General Hospital · JPKumamoto Medical Center · JPKurashiki Central Hospital · JPKyoto University · JPKyushu University · JPNagoya Ekisaikai Hospital · JPNational Hospital Organization · JPNational Hospital Organization Kyushu Cancer Center · JPNational Kinki Chuo Hospital for Chest Disease · JPNational Sanyo Hospital · JPOsaka City General Hospital · JPOsaka City University · JPOsaka Medical Center for Cancer and Cardiovascular Diseases · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Archival formalin-fixed, paraffin-embedded (FFPE) tumor specimens were collected from advanced NSCLC patients enrolled in LETS phase III trial comparing first-line S-1/carboplatin with paclitaxel/carboplatin and subjected to multiplex genotyping for 214 somatic hotspot mutations in 26 genes (LungCarta Panel) and 20 major variants of ALK, RET, and ROS1 fusion genes (LungFusion Panel) with the Sequenom MassARRAY platform. MET amplification was evaluated by fluorescence in situ hybridization. A somatic mutation in at least one gene was identified in 48% of non-squamous cell carcinoma and 45% of squamous cell carcinoma specimens, with EGFR (17%), TP53 (11%), STK11 (9.8%), MET (7.6%), and KRAS (6.2%). Mutations in EGFR or KRAS were associated with a longer or shorter median overall survival, respectively. The LungFusion Panel identified ALK fusions in six cases (2.5%), ROS1 fusions in five cases (2.1%), and a RET fusion in one case (0.4%), with these three types of rearrangement being mutually exclusive. Nine (3.9%) of 229 patients were found to be positive for de novo MET amplification. This first multiplex genotyping of NSCLC associated with a phase III trial shows that MassARRAY-based genetic testing for somatic mutations and fusion genes performs well with nucleic acid derived from FFPE specimens of NSCLC tissue.

Indexed as

AdultAgedAntineoplastic Combined Chemotherapy ProtocolsCarboplatinCarcinoma, Non-Small-Cell LungDNA Mutational AnalysisDrug CombinationsFemaleGene Expression ProfilingHumansIn Situ Hybridization, FluorescenceKaplan-Meier EstimateLung NeoplasmsMaleMass SpectrometryMiddle AgedCarboplatinDrug CombinationsOxonic AcidPaclitaxelS 1 (combination)Tegafur

Identifiers

PMID24810493
PMCPMC4039163
OpenAlexW1553102093

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.