Evidence map›Paper›PMID 24810058›Full record

ArticleCell death & disease2014

Transcriptional and metabolic adaptation of human neurons to the mitochondrial toxicant MPP(+).

A K Krug, S Gutbier, L Zhao, D Pöltl, C Kullmann, V Ivanova, S Förster, S Jagtap, J Meiser, G Leparc and 8 more

Open access · goldAbstract read
In one paragraph

Article in Cell death & disease, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 105 citations in OpenAlex.

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  18. Metabolic Targets of Coenzyme Q10 in Mitochondria.Antioxidants (Basel, Switzerland) · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 4 countries.

A K KrugDoerenkamp-Zbinden Chair for In Vitro Toxicology and Biomedicine, University of Konstanz, Konstanz D-78457, Germany.
S GutbierDoerenkamp-Zbinden Chair for In Vitro Toxicology and Biomedicine, University of Konstanz, Konstanz D-78457, Germany.
L ZhaoCenter for Alternatives to Animal Testing (CAAT-US), Johns Hopkins Bloomberg School of Public Health, Baltimore, MD 21205, USA.
D Pöltl1] Doerenkamp-Zbinden Chair for In Vitro Toxicology and Biomedicine, University of Konstanz, Konstanz D-78457, Germany [2] Konstanz Research School Chemical Biology, University of Konstanz, Konstanz, Germany.
C KullmannDoerenkamp-Zbinden Chair for In Vitro Toxicology and Biomedicine, University of Konstanz, Konstanz D-78457, Germany.
V Ivanova1] Konstanz Research School Chemical Biology, University of Konstanz, Konstanz, Germany [2] Nycomed Chair for Bioinformatics and Information Mining, University of Konstanz, Konstanz D-78457, Germany.
S FörsterDoerenkamp-Zbinden Chair for In Vitro Toxicology and Biomedicine, University of Konstanz, Konstanz D-78457, Germany.
S JagtapCenter of Physiology and Pathophysiology, Institute of Neurophysiology, University of Cologne, Cologne D-50931, Germany.
J MeiserLuxembourg Centre for Systems Biomedicine, University of Luxembourg, Campus Belval, Esch-Belval L-4362, Luxembourg.
G LeparcBoehringer Ingelheim Pharma GmbH & Co. KG Div. Research, Ingelheim, Germany.
S SchildknechtDoerenkamp-Zbinden Chair for In Vitro Toxicology and Biomedicine, University of Konstanz, Konstanz D-78457, Germany.
M AdamDoerenkamp-Zbinden Chair for In Vitro Toxicology and Biomedicine, University of Konstanz, Konstanz D-78457, Germany.
K HillerLuxembourg Centre for Systems Biomedicine, University of Luxembourg, Campus Belval, Esch-Belval L-4362, Luxembourg.
H FarhanBiotechnology Institute Thurgau at the University of Konstanz, Kreuzlingen CH-8280, Switzerland.
T BrunnerChair of Biochemical Pharmacology, University of Konstanz, Konstanz D-78457, Germany.
T HartungCenter for Alternatives to Animal Testing (CAAT-US), Johns Hopkins Bloomberg School of Public Health, Baltimore, MD 21205, USA.
A SachinidisCenter of Physiology and Pathophysiology, Institute of Neurophysiology, University of Cologne, Cologne D-50931, Germany.
M LeistDoerenkamp-Zbinden Chair for In Vitro Toxicology and Biomedicine, University of Konstanz, Konstanz D-78457, Germany.
University of Konstanz · DEJohns Hopkins University · USUniversity of Cologne · DEUniversity of Luxembourg · LUBiotechnology Institute Thurgau · CHBoehringer Ingelheim (Germany) · DE

Funding

Mapping the Human Toxome by Systems ToxicologyR01ES020750 · NIEHS · JOHNS HOPKINS UNIVERSITY · PI HARTUNG, THOMAS · 2011 to 2015
$6.0M
Developmental neurotoxicity pathways for high throughput testing by metabolomicsU01FD004230 · FDA · JOHNS HOPKINS UNIVERSITY · PI HARTUNG, THOMAS · 2011 to 2012
$815k
FDA HHS U01 FD004230FDA HHS U01FD004230NIEHS NIH HHS R01 ES020750NIEHS NIH HHS R01ES020750
6 · The paper itself

Abstract

Assessment of the network of toxicity pathways by Omics technologies and bioinformatic data processing paves the road toward a new toxicology for the twenty-first century. Especially, the upstream network of responses, taking place in toxicant-treated cells before a point of no return is reached, is still little explored. We studied the effects of the model neurotoxicant 1-methyl-4-phenylpyridinium (MPP(+)) by a combined metabolomics (mass spectrometry) and transcriptomics (microarrays and deep sequencing) approach to provide unbiased data on earliest cellular adaptations to stress. Neural precursor cells (LUHMES) were differentiated to homogeneous cultures of fully postmitotic human dopaminergic neurons, and then exposed to the mitochondrial respiratory chain inhibitor MPP(+) (5 μM). At 18-24 h after treatment, intracellular ATP and mitochondrial integrity were still close to control levels, but pronounced transcriptome and metabolome changes were seen. Data on altered glucose flux, depletion of phosphocreatine and oxidative stress (e.g., methionine sulfoxide formation) confirmed the validity of the approach. New findings were related to nuclear paraspeckle depletion, as well as an early activation of branches of the transsulfuration pathway to increase glutathione. Bioinformatic analysis of our data identified the transcription factor ATF-4 as an upstream regulator of early responses. Findings on this signaling pathway and on adaptive increases of glutathione production were confirmed biochemically. Metabolic and transcriptional profiling contributed complementary information on multiple primary and secondary changes that contribute to the cellular response to MPP(+). Thus, combined 'Omics' analysis is a new unbiased approach to unravel earliest metabolic changes, whose balance decides on the final cell fate.

Indexed as

1-Methyl-4-phenylpyridiniumActivating Transcription Factor 4Adaptation, PhysiologicalAdenosine TriphosphateCell LineComputational BiologyDopaminergic NeuronsEnergy MetabolismGene Expression ProfilingGene Expression RegulationGlucoseGlutathioneHigh-Throughput Nucleotide SequencingHumansMass SpectrometryMetabolomics1-Methyl-4-phenylpyridiniumActivating Transcription Factor 4Adenosine TriphosphateATF4 protein, humanGlucoseGlutathionePhosphocreatine

Identifiers

PMID24810058
PMCPMC4047858
OpenAlexW2146767124

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.