Evidence map›Paper›PMID 24809695›Full record

ArticlePloS one2014

Toward discovering new anti-cancer agents targeting topoisomerase IIα: a facile screening strategy adaptable to high throughput platform.

Yu-Shih Lin, Wan-Chen Huang, Mei-Shya Chen, Tao-Shih Hsieh

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Human topoisomerase II alpha as a prognostic biomarker in cancer chemotherapy.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Yu-Shih LinInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.
Wan-Chen HuangInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.
Mei-Shya ChenInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.
Tao-Shih HsiehInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan; Department of Biochemistry, Duke University Medical Center, Durham, North Carolina, United States of America.
Institute of Cellular and Organismic Biology, Academia Sinica · TWDuke Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Topoisomerases are a family of vital enzymes capable of resolving topological problems in DNA during various genetic processes. Topoisomerase poisons, blocking reunion of cleaved DNA strands and stabilizing enzyme-mediated DNA cleavage complex, are clinically important antineoplastic and anti-microbial agents. However, the rapid rise of drug resistance that impedes the therapeutic efficacy of these life-saving drugs makes the discovering of new lead compounds ever more urgent. We report here a facile high throughput screening system for agents targeting human topoisomerase IIα (Top2α). The assay is based on the measurement of fluorescence anisotropy of a 29 bp fluorophore-labeled oligonucleotide duplex. Since drug-stabilized Top2α-bound DNA has a higher anisotropy compared with free DNA, this assay can work if one can use a dissociating agent to specifically disrupt the enzyme/DNA binary complexes but not the drug-stabilized ternary complexes. Here we demonstrate that NaClO4, a chaotropic agent, serves a critical role in our screening method to differentiate the drug-stabilized enzyme/DNA complexes from those that are not. With this strategy we screened a chemical library of 100,000 compounds and obtained 54 positive hits. We characterized three of them on this list and demonstrated their effects on the Top2α-mediated reactions. Our results suggest that this new screening strategy can be useful in discovering additional candidates of anti-cancer agents.

Indexed as

High-Throughput Screening AssaysAntigens, NeoplasmAntineoplastic AgentsBase SequenceDNADNA-Binding ProteinsDNA Topoisomerases, Type IIDrug InteractionsDrug Screening Assays, AntitumorHCT116 CellsHumansModels, MolecularMolecular Targeted TherapyNucleic Acid ConformationPerchloratesSodium CompoundsAntigens, NeoplasmAntineoplastic AgentsDNADNA-Binding ProteinsDNA Topoisomerases, Type IIPerchloratesSodium Compoundssodium perchlorateTeniposideTopoisomerase II Inhibitors

Identifiers

PMID24809695
PMCPMC4014593
OpenAlexW2018499577

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.