Evidence map›Paper›PMID 24805368›Full record

ArticlePloS one2014

Development of an allele-specific PCR assay for simultaneous sero-typing of avian pathogenic Escherichia coli predominant O1, O2, O18 and O78 strains.

Shaohui Wang, Qingmei Meng, Jianjun Dai, Xiangan Han, Yue Han, Chan Ding, Haiwen Liu, Shengqing Yu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 45 citations in OpenAlex.

  1. Direct interaction between avian pathogenicMicrobiology spectrum · 2026
    Article
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  3. Molecular Characterization and Antibiotic Resistance of Avian PathogenicAnimals : an open access journal from MDPI · 2025
    Article
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  5. Article
  6. Article
  7. Article
  8. Article
  9. Isolation and identification of specificFrontiers in microbiology · 2024
    Article
  10. Co-Occurrence ofAntibiotics (Basel, Switzerland) · 2023
    Article
  11. Article
  12. A lytic phage to control multidrug-resistant avian pathogenicFrontiers in cellular and infection microbiology · 2023
    Article
  13. Article
  14. Investigation of Serotype Prevalence ofVeterinary sciences · 2022
    Article
  15. Review
  16. Article
  17. Prevalence and Genetic Relationship of PredominantVeterinary medicine international · 2021
    Article
  18. Deletion of theFrontiers in veterinary science · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Shaohui WangShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Shanghai, China.
Qingmei MengShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Shanghai, China; Key Lab of Animal Bacteriology, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, China.
Jianjun DaiKey Lab of Animal Bacteriology, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, China.
Xiangan HanShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Shanghai, China.
Yue HanShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Shanghai, China.
Chan DingShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Shanghai, China.
Haiwen LiuShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Shanghai, China.
Shengqing YuShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Shanghai, China.
Chinese Academy of Agricultural Sciences · CNShanghai Veterinary Research Institute · CNNanjing Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Systemic infections by avian pathogenic Escherichia coli (APEC) are economically devastating to poultry industries worldwide. E. coli strains belonging to serotypes O1, O2, O18 and O78 are preferentially associated with avian colibacillosis. The rfb gene cluster controlling O antigen synthesis is usually various among different E. coli serotypes. In present study, the rfb gene clusters of E. coli serotypes O1, O2, O18 and O78 were characterized and compared. Based on the serotype-specific genes in rfb gene cluster, an allele-specific polymerase chain reaction (PCR) assay was developed. This PCR assay was highly specific and reliable for sero-typing of APEC O1, O2, O18 and O78 strains. The sensitivity of the assay was determined as 10 pg DNA or 10 colony forming units (CFUs) bacteria for serotypes O2 and O18 strains, and 500 pg DNA or 1,000 CFUs bacteria for serotypes O1 and O78 strains. Using this PCR system, APEC isolates and the infected tissue samples were categorized successfully. Furthermore, it was able to differentiate the serotypes for the samples with multi-agglutination in the traditional serum agglutination assay. Therefore, the allele-specific PCR is more simple, rapid and accurate assay for APEC diagnosis, epidemiologic study and vaccine development.

Indexed as

PhylogenyAllelesAnimalsChickensEscherichia coliEscherichia coli InfectionsEscherichia coli ProteinsPolymerase Chain ReactionPoultryPoultry DiseasesSerotypingEscherichia coli Proteins

Identifiers

PMID24805368
PMCPMC4013041
OpenAlexW2003742548

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.