Evidence map›Paper›PMID 24804963›Full record

ArticlePloS one2014

Tomato genome-wide transcriptional responses to Fusarium wilt and Tomato Mosaic Virus.

Giuseppe Andolfo, Francesca Ferriello, Luca Tardella, Alberto Ferrarini, Loredana Sigillo, Luigi Frusciante, Maria Raffaella Ercolano

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 32 citations in OpenAlex.

  1. Solanaceous vegetables andHorticulture research · 2026
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  10. Draft of Zucchini (Frontiers in genetics · 2017
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  13. Plant Innate Immunity Multicomponent Model.Frontiers in plant science · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Giuseppe AndolfoDepartment of Agriculture Sciences, University of Naples 'Federico II', Portici, Italy.
Francesca FerrielloDepartment of Agriculture Sciences, University of Naples 'Federico II', Portici, Italy.
Luca TardellaDepartment of Statistical Sciences, University of Rome 'La Sapienza', Rome, Italy.
Alberto FerrariniDipartimento di Biotecnologie - Università degli Studi di Verona, Strada le Grazie, Verona, Italy.
Loredana SigilloConsiglio per la Ricerca e Sperimentazione in Agricoltura - Centro di sperimentazione e certificazione delle sementi (CRA-SCS) S.S., Battipaglia (SA), Roma, Italy.
Luigi FruscianteDepartment of Agriculture Sciences, University of Naples 'Federico II', Portici, Italy.
Maria Raffaella ErcolanoDepartment of Agriculture Sciences, University of Naples 'Federico II', Portici, Italy.
University of Naples Federico II · ITCentro di Ricerca per l’Orticoltura · ITSapienza University of Rome · ITUniversity of Verona · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Since gene expression approaches constitute a starting point for investigating plant-pathogen systems, we performed a transcriptional analysis to identify a set of genes of interest in tomato plants infected with F. oxysporum f. sp. lycopersici (Fol) and Tomato Mosaic Virus (ToMV). Differentially expressed tomato genes upon inoculation with Fol and ToMV were identified at two days post-inoculation. A large overlap was found in differentially expressed genes throughout the two incompatible interactions. However, Gene Ontology enrichment analysis evidenced specific categories in both interactions. Response to ToMV seems more multifaceted, since more than 70 specific categories were enriched versus the 30 detected in Fol interaction. In particular, the virus stimulated the production of an invertase enzyme that is able to redirect the flux of carbohydrates, whereas Fol induced a homeostatic response to prevent the fungus from killing cells. Genomic mapping of transcripts suggested that specific genomic regions are involved in resistance response to pathogen. Coordinated machinery could play an important role in prompting the response, since 60% of pathogen receptor genes (NB-ARC-LRR, RLP, RLK) were differentially regulated during both interactions. Assessment of genomic gene expression patterns could help in building up models of mediated resistance responses.

Indexed as

FusariumGene Expression Regulation, PlantPlant DiseasesPlant ProteinsSolanum lycopersicumTobamovirusPlant Proteins

Identifiers

PMID24804963
PMCPMC4012952
OpenAlexW2032779013

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.