Evidence map›Paper›PMID 24803572›Full record

ArticleGenome biology and evolution2014

Massive losses of taste receptor genes in toothed and baleen whales.

Ping Feng, Jinsong Zheng, Stephen J Rossiter, Ding Wang, Huabin Zhao

Open access · goldAbstract read
In one paragraph

Article in Genome biology and evolution, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
13.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 141 citations in OpenAlex.

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14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Ping FengDepartment of Zoology, College of Life Sciences, Wuhan University, China.
Jinsong ZhengInstitute of Hydrobiology, Chinese Academy of Sciences, Wuhan, China.
Stephen J RossiterSchool of Biological and Chemical Sciences, Queen Mary, University of London, United Kingdom.
Ding WangInstitute of Hydrobiology, Chinese Academy of Sciences, Wuhan, China.
Huabin ZhaoDepartment of Zoology, College of Life Sciences, Wuhan University, China huabinzhao@whu.edu.cn.
Wuhan University · CNChinese Academy of Sciences · CNInstitute of Hydrobiology · CNQueen Mary University of London · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Taste receptor genes are functionally important in animals, with a surprising exception in the bottlenose dolphin, which shows extensive losses of sweet, umami, and bitter taste receptor genes. To examine the generality of taste gene loss, we examined seven toothed whales and five baleen whales and sequenced the complete repertoire of three sweet/umami (T1Rs) and ten bitter (T2Rs) taste receptor genes. We found all amplified T1Rs and T2Rs to be pseudogenes in all 12 whales, with a shared premature stop codon in 10 of the 13 genes, which demonstrated massive losses of taste receptor genes in the common ancestor of whales. Furthermore, we analyzed three genome sequences from two toothed whales and one baleen whale and found that the sour taste marker gene Pkd2l1 is a pseudogene, whereas the candidate salty taste receptor genes are intact and putatively functional. Additionally, we examined three genes that are responsible for taste signal transduction and found the relaxation of functional constraints on taste signaling pathways along the ancestral branch leading to whales. Together, our results strongly suggest extensive losses of sweet, umami, bitter, and sour tastes in whales, and the relaxation of taste function most likely arose in the common ancestor of whales between 36 and 53 Ma. Therefore, whales represent the first animal group to lack four of five primary tastes, probably driven by the marine environment with high concentration of sodium, the feeding behavior of swallowing prey whole, and the dietary switch from plants to meat in the whale ancestor.

Indexed as

Evolution, MolecularTasteAnimalsBase SequenceBiological EvolutionFeeding BehaviorMolecular Sequence DataPseudogenesReceptors, G-Protein-CoupledTaste BudsWhalesReceptors, G-Protein-Coupleddietevolutionpseudogenizationtaste receptorwhales

Identifiers

PMID24803572
PMCPMC4079202
OpenAlexW2166987556

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.