Evidence map›Paper›PMID 24803433›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Antibiotics induce redox-related physiological alterations as part of their lethality.

Daniel J Dwyer, Peter A Belenky, Jason H Yang, I Cody MacDonald, Jeffrey D Martell, Noriko Takahashi, Clement T Y Chan, Michael A Lobritz, Dana Braff, Eric G Schwarz and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 513 papers.

0numbers the graph read from it
0cells of the map it votes in
513citing papers in PubMed
48.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

513 citing papers in PubMed, 930 citations in OpenAlex.

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  17. Metabolism-Based Biomarkers for Rapid Phenotypic Antibiotic Susceptibility Testing.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
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453 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 1 country.

Daniel J DwyerHoward Hughes Medical Institute,Departments of Biomedical Engineering andCenter of Synthetic Biology, Boston University, Boston, MA 02215;
Peter A BelenkyHoward Hughes Medical Institute,Departments of Biomedical Engineering andCenter of Synthetic Biology, Boston University, Boston, MA 02215;
Jason H YangHoward Hughes Medical Institute,Departments of Biomedical Engineering andCenter of Synthetic Biology, Boston University, Boston, MA 02215;ORCID http://orcid.org/0000-0003-0921-4657
I Cody MacDonaldHoward Hughes Medical Institute,Departments of Biomedical Engineering andCenter of Synthetic Biology, Boston University, Boston, MA 02215;
Jeffrey D MartellDepartments of Chemistry and.
Noriko TakahashiBiology, Massachusetts Institute of Technology, Cambridge, MA 02139;
Clement T Y ChanHoward Hughes Medical Institute,Departments of Biomedical Engineering andCenter of Synthetic Biology, Boston University, Boston, MA 02215;
Michael A LobritzHoward Hughes Medical Institute,Departments of Biomedical Engineering andCenter of Synthetic Biology, Boston University, Boston, MA 02215;Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA 02115;Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA 02114;
Dana BraffHoward Hughes Medical Institute,Departments of Biomedical Engineering andCenter of Synthetic Biology, Boston University, Boston, MA 02215;
Eric G SchwarzHoward Hughes Medical Institute,Departments of Biomedical Engineering andCenter of Synthetic Biology, Boston University, Boston, MA 02215;
Jonathan D YeHoward Hughes Medical Institute,Departments of Biomedical Engineering andCenter of Synthetic Biology, Boston University, Boston, MA 02215;
Mekhala PatiChemistry, and.
Maarten VercruysseBiology, Massachusetts Institute of Technology, Cambridge, MA 02139;
Paul S RalifoChemistry, and.
Kyle R AllisonDepartment of Systems Biology, Columbia University, New York, NY 10032; and.
Ahmad S KhalilDepartments of Biomedical Engineering andCenter of Synthetic Biology, Boston University, Boston, MA 02215;Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA 02115;
Alice Y TingDepartments of Chemistry and.
Graham C WalkerBiology, Massachusetts Institute of Technology, Cambridge, MA 02139;
James J CollinsHoward Hughes Medical Institute,Departments of Biomedical Engineering andCenter of Synthetic Biology, Boston University, Boston, MA 02215;Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA 02115;Department of Medicine, Boston University School of Medicine, Boston, MA 02118 jcollins@bu.edu.
Howard Hughes Medical Institute · USBoston University · USMassachusetts Institute of Technology · USColumbia University · USHarvard University · USMassachusetts General Hospital · US

Funding

MUTAGENESIS AND REPAIR OF DNAR01CA021615 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI WALKER, GRAHAM C · 1985 to 2019
$6.5M
A Network Biology Approach to Antibiotic Action and Bacterial Defense MechanismsDP1OD003644 · OD · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI COLLINS, JAMES J · 2007 to 2011
$4.1M
Enabling the study of endogenous proteins in live cellsDP1OD003961 · OD · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI TING, ALICE Y · 2008 to 2011
$3.4M
Howard Hughes Medical InstituteNCI NIH HHS R01 CA021615NIH HHS DP1 OD003644NIH HHS DP1 OD003961
6 · The paper itself

Abstract

Deeper understanding of antibiotic-induced physiological responses is critical to identifying means for enhancing our current antibiotic arsenal. Bactericidal antibiotics with diverse targets have been hypothesized to kill bacteria, in part by inducing production of damaging reactive species. This notion has been supported by many groups but has been challenged recently. Here we robustly test the hypothesis using biochemical, enzymatic, and biophysical assays along with genetic and phenotypic experiments. We first used a novel intracellular H2O2 sensor, together with a chemically diverse panel of fluorescent dyes sensitive to an array of reactive species to demonstrate that antibiotics broadly induce redox stress. Subsequent gene-expression analyses reveal that complex antibiotic-induced oxidative stress responses are distinct from canonical responses generated by supraphysiological levels of H2O2. We next developed a method to quantify cellular respiration dynamically and found that bactericidal antibiotics elevate oxygen consumption, indicating significant alterations to bacterial redox physiology. We further show that overexpression of catalase or DNA mismatch repair enzyme, MutS, and antioxidant pretreatment limit antibiotic lethality, indicating that reactive oxygen species causatively contribute to antibiotic killing. Critically, the killing efficacy of antibiotics was diminished under strict anaerobic conditions but could be enhanced by exposure to molecular oxygen or by the addition of alternative electron acceptors, indicating that environmental factors play a role in killing cells physiologically primed for death. This work provides direct evidence that, downstream of their target-specific interactions, bactericidal antibiotics induce complex redox alterations that contribute to cellular damage and death, thus supporting an evolving, expanded model of antibiotic lethality.

Indexed as

Oxidation-ReductionAnti-Bacterial AgentsAntioxidantsCatalaseCell RespirationDNA RepairEscherichia coliEscherichia coli ProteinsFluorescent DyesGene Expression Regulation, BacterialGreen Fluorescent ProteinsHydrogen PeroxideMutagenesisMutS DNA Mismatch-Binding ProteinOligonucleotide Array Sequence AnalysisOxidative StressAnti-Bacterial AgentsAntioxidantsCatalaseEscherichia coli ProteinsFluorescent DyesGreen Fluorescent ProteinsHydrogen PeroxidekatG protein, E coliMutS DNA Mismatch-Binding ProteinOxygenReactive Oxygen SpeciesDNA repairmutagenesisreactive oxygen species

Identifiers

PMID24803433
PMCPMC4034191
OpenAlexW2039045853

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.