Evidence map›Paper›PMID 24802796›Full record

ArticleMolecular biology reports2014

DNA barcode ITS2 coupled with high resolution melting (HRM) analysis for taxonomic identification of Sideritis species growing in Greece.

Apostolos Kalivas, Ioannis Ganopoulos, Aliki Xanthopoulou, Paschalina Chatzopoulou, Athanasios Tsaftaris, Panagiotis Madesis

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Article in Molecular biology reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. DNA Barcoding and Fertilization Strategies inInternational journal of molecular sciences · 2024
    Article
  5. Article
  6. Review
  7. Review
  8. Plants (Basel, Switzerland) · 2022
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Antioxidants (Basel, Switzerland) · 2019
    Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

6 authors.

Apostolos KalivasCotton and Industrial Plants Institute, Hellenic Agricultural Organization "Demeter", Thermi, 57001, Thessaloniki, Greece.
Ioannis Ganopoulos
Aliki Xanthopoulou
Paschalina Chatzopoulou
Athanasios Tsaftaris
Panagiotis Madesis

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identification of genotypes in Sideritis is complicated owing to the morphological similarity and common occurrence of natural hybridisation within Sideritis species. Species- and genotype-specific DNA markers are very useful for plant identification, breeding and preservation programs. Herein, a real-time polymerase chain reaction (PCR) of ITS2 barcode region coupled with high resolution melting-curve (HRM) analysis was evaluated for an accurate, rapid and sensitive tool for species identification focusing on seven Sideritis species growing in Greece. The HRM assay developed in this study is a rapid and straightforward method for the identification and discrimination of the investigated Sideritis species. This assay is simple compared to other genotyping methods as it does not require DNA sequencing or post-PCR processing. Therefore, this method offers a new alternative for rapid detection of Sideritis species.

Indexed as

Base SequenceDNA Barcoding, TaxonomicDNA, PlantDNA PrimersDNA, Ribosomal SpacerGenetic MarkersGenotyping TechniquesGreeceMolecular Sequence DataPhylogenyPhylogeographyReal-Time Polymerase Chain ReactionSequence AlignmentSideritisDNA, PlantDNA PrimersDNA, Ribosomal SpacerGenetic Markers

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.