ReviewChromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology2014
Control of transposable elements in Arabidopsis thaliana.
Review in Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
25 citing papers in PubMed, 66 citations in OpenAlex.
- Insights into the Evolution of Ohnologous Sequences and Their Epigenetic Marks Post-WGD in Malus Domestica.Genome biology and evolution · 2023Article
- Arms race between anti-silencing and RdDM in noncoding regions of transposable elements.EMBO reports · 2023Article
- Impacts of DNA methylases and demethylases on the methylation and expression of Arabidopsis ethylene signal pathway genes.Functional & integrative genomics · 2023Article
- De novo genome assembly of the medicinal plant Gentiana macrophylla provides insights into the genomic evolution and biosynthesis of iridoids.DNA research : an international journal for rapid publication of reports on genes and genomes · 2022Article
- Evolution of complex genome architecture in gymnosperms.GigaScience · 2022Article
- Comprehensive Mechanism of Gene Silencing and Its Role in Plant Growth and Development.Frontiers in plant science · 2021Review
- RNA interference-independent reprogramming of DNA methylation in Arabidopsis.Nature plants · 2020Article
- Mosquito genomes are frequently invaded by transposable elements through horizontal transfer.PLoS genetics · 2020Article
- TDP-43 prevents retrotransposon activation in the Drosophila motor system through regulation of Dicer-2 activity.BMC biology · 2020Article
- Redistribution of Meiotic Crossovers Along Wheat Chromosomes by Virus-Induced Gene Silencing.Frontiers in plant science · 2020Article
- Monitoring the interplay between transposable element families and DNA methylation in maize.PLoS genetics · 2019Article
- Hybrid Decay: A Transgenerational Epigenetic Decline in Vigor and Viability Triggered in Backcross Populations of Teosinte with Maize.Genetics · 2019Article
- Invasive DNA elements modify the nuclear architecture of their insertion site by KNOT-linked silencing in Arabidopsis thaliana.Genome biology · 2019Article
- Transcription of soybean retrotransposon SORE-1 is temporally upregulated in developing ovules.Planta · 2018Article
- The Evolutionary Consequences of Transposon-Related Pericentromer Expansion in Melon.Genome biology and evolution · 2018Article
- Plant Lineage-Specific Amplification of Transcription Factor Binding Motifs by Miniature Inverted-Repeat Transposable Elements (MITEs).Genome biology and evolution · 2018Article
- Analysis of somaclonal variation in transgenic and regenerated plants of Arabidopsis thaliana using methylation related metAFLP and TMD markers.Plant cell reports · 2018Article
- Evolution of sequence-specific anti-silencing systems in Arabidopsis.Nature communications · 2017Article
- Impact of transposable elements on polyploid plant genomes.Annals of botany · 2017Review
- Genomic Rearrangements inGenetics · 2017Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
2 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Arabidopsis thaliana serves as a very good model organism to investigate the control of transposable elements (TEs) by genetic and genomic approaches. As TE movements are potentially deleterious to the hosts, hosts silence TEs by epigenetic mechanisms, such as DNA methylation. DNA methylation is controlled by DNA methyltransferases and other regulators, including histone modifiers and chromatin remodelers. RNAi machinery directs DNA methylation to euchromatic TEs, which is under developmental control. In addition to the epigenetic controls, some TEs are controlled by environmental factors. TEs often affect expression of nearby genes, providing evolutionary sources for epigenetic, developmental, and environmental gene controls, which could even be beneficial for the host.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.