Evidence map›Paper›PMID 24799598›Full record

ArticleThe Journal of infectious diseases2014

A systematic and functional classification of Streptococcus pyogenes that serves as a new tool for molecular typing and vaccine development.

Martina Sanderson-Smith, David M P De Oliveira, Julien Guglielmini, David J McMillan, Therese Vu, Jessica K Holien, Anna Henningham, Andrew C Steer, Debra E Bessen, James B Dale and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 180 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
180citing papers in PubMed, 2 pooled it
30.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

180 citing papers in PubMed, 2 syntheses or guidelines pooled it, 315 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Randomized Trial of Community Treatment With Azithromycin and Ivermectin Mass Drug Administration for Control of Scabies and Impetigo.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2019
    Trial
  5. Article
  6. Predominance of M1European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Article
  7. Article
  8. Observational
  9. Virulence insights from ancient strep A.Communications biology · 2026
    Article
  10. Article
  11. Article
  12. Article
  13. The rise and spread of invasiveMicrobial genomics · 2026
    Article
  14. Article
  15. Article
  16. Strain-Level Typing ofACS infectious diseases · 2025
    Article
  17. Article
  18. Observational
  19. Article
  20. Article

120 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 14 institutions in 5 countries.

Martina Sanderson-SmithIllawarra Health and Medical Research Institute and School of Biological Sciences, University of Wollongong, Australia.
David M P De OliveiraIllawarra Health and Medical Research Institute and School of Biological Sciences, University of Wollongong, Australia.
Julien GuglielminiMicrobial Evolutionary Genomics, Département Génomes et Génétique, Institut Pasteur CNRS, UMR3525, Paris, France.
David J McMillanBacterial Pathogenesis Laboratory, QIMR Berghofer Medical Research Institute, Brisbane Inflammation and Healing Research Cluster, School of Health and Sports Sciences, University of the Sunshine Coast, Sippy Downs, Australia.
Therese VuBacterial Pathogenesis Laboratory, QIMR Berghofer Medical Research Institute, Brisbane Laboratoire de Génétique et Physiologie Bactérienne, Institut de Biologie et de Médecine Moléculaires, Faculté des Sciences, Université Libre de Bruxelles, Gosselies, Belgium.
Jessica K HolienBiota Structural Biology Laboratory, ACRF Rational Drug Discovery Centre, St. Vincent's Institute of Medical Research, Melbourne.
Anna HenninghamSchool of Chemistry and Molecular Biosciences and Australian Infectious Diseases Research Centre, University of Queensland, Brisbane.
Andrew C SteerMurdoch Children Research Institute Centre for International Child Health, The University of Melbourne Department of General Medicine, Royal Children's Hospital Melbourne, Australia.
Debra E BessenDepartment of Microbiology and Immunology, New York Medical College, Valhalla.
James B DaleDepartment of Medicine, The University of Tennessee Health Science Center Department of Veterans Affairs Medical Center, and Department of Microbiology, Immunology and Biochemistry, The University of Tennessee Health Science Center, Memphis.
Nigel CurtisMurdoch Children Research Institute Infectious Diseases Unit, Royal Children's Hospital Melbourne Department of Paediatrics, The University of Melbourne, Australia.
Bernard W BeallRespiratory Diseases Branch, Centers for Disease Control and Prevention, Atlanta, Georgia.
Mark J WalkerSchool of Chemistry and Molecular Biosciences and Australian Infectious Diseases Research Centre, University of Queensland, Brisbane.
Michael W ParkerBiota Structural Biology Laboratory, ACRF Rational Drug Discovery Centre, St. Vincent's Institute of Medical Research, Melbourne Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne.
Jonathan R CarapetisTelethon Institute for Child Health Research, Centre for Child Health Research, University of Western Australia, Perth.
Laurence Van MelderenLaboratoire de Génétique et Physiologie Bactérienne, Institut de Biologie et de Médecine Moléculaires, Faculté des Sciences, Université Libre de Bruxelles, Gosselies, Belgium.
Kadaba S SriprakashBacterial Pathogenesis Laboratory, QIMR Berghofer Medical Research Institute, Brisbane.
Pierre R SmeestersLaboratoire de Génétique et Physiologie Bactérienne, Institut de Biologie et de Médecine Moléculaires, Faculté des Sciences, Université Libre de Bruxelles, Gosselies, Belgium Murdoch Children Research Institute.
M Protein Study Group
QIMR Berghofer Medical Research Institute · AUUniversité Libre de Bruxelles · BEUniversity of Queensland · AUUniversity of Wollongong · AUCenters for Disease Control and Prevention · USCentre National de la Recherche Scientifique · FRDiscovery Centre · CANew York Medical College · USRoyal Children's Hospital · AUSt Vincents Institute of Medical Research · AUThe Kids Research Institute Australia · AUUniversity of Melbourne · AUUniversity of Tennessee Health Science Center · USUniversity of the Sunshine Coast · AU

Funding

Vaccine Prevention of Group A Streptococcal InfectionsR01AI010085 · NIAID · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI DALE, JAMES B. · 1985 to 2016
$2.4M
NIAID NIH HHS R01 AI010085
6 · The paper itself

Abstract

Streptococcus pyogenes ranks among the main causes of mortality from bacterial infections worldwide. Currently there is no vaccine to prevent diseases such as rheumatic heart disease and invasive streptococcal infection. The streptococcal M protein that is used as the substrate for epidemiological typing is both a virulence factor and a vaccine antigen. Over 220 variants of this protein have been described, making comparisons between proteins difficult, and hindering M protein-based vaccine development. A functional classification based on 48 emm-clusters containing closely related M proteins that share binding and structural properties is proposed. The need for a paradigm shift from type-specific immunity against S. pyogenes to emm-cluster based immunity for this bacterium should be further investigated. Implementation of this emm-cluster-based system as a standard typing scheme for S. pyogenes will facilitate the design of future studies of M protein function, streptococcal virulence, epidemiological surveillance, and vaccine development.

Indexed as

Gene Expression Regulation, BacterialAmino Acid SequenceBacterial ProteinsCloning, MolecularMolecular Sequence DataPhylogenyRecombinant ProteinsStreptococcal VaccinesStreptococcus pyogenesBacterial ProteinsRecombinant ProteinsStreptococcal VaccinesepidemiologyfibrinogenIgAIgGmolecular typingM proteinplasminogenStreptococcus pyogenesvaccine

Identifiers

PMID24799598
PMCPMC6083926
OpenAlexW2103458678

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.