Evidence map›Paper›PMID 24798327›Full record

ArticleThe Journal of biological chemistry2014

The splicing factor FUBP1 is required for the efficient splicing of oncogene MDM2 pre-mRNA.

Aishwarya G Jacob, Ravi K Singh, Fuad Mohammad, Thomas W Bebee, Dawn S Chandler

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 37 citations in OpenAlex.

  1. Journal of virology · 2026
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  11. Article
  12. SRSF2 Regulation ofMolecular cancer research : MCR · 2020
    Article
  13. Article
  14. Article
  15. Review
  16. Mechanistic studies of a small-molecule modulator of SMN2 splicing.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Aishwarya G JacobFrom the Center for Childhood Cancer, Research Institute at Nationwide Children's Hospital, Columbus, Ohio 43205 and the Department of Pediatrics, Molecular, Cellular and Developmental Biology Program, and Center for RNA Biology, Wexner Medical Center, The Ohio State University, Columbus, Ohio 43210.
Ravi K SinghFrom the Center for Childhood Cancer, Research Institute at Nationwide Children's Hospital, Columbus, Ohio 43205 and the Department of Pediatrics, Molecular, Cellular and Developmental Biology Program, and.
Fuad MohammadFrom the Center for Childhood Cancer, Research Institute at Nationwide Children's Hospital, Columbus, Ohio 43205 and Center for RNA Biology, Wexner Medical Center, The Ohio State University, Columbus, Ohio 43210.
Thomas W BebeeFrom the Center for Childhood Cancer, Research Institute at Nationwide Children's Hospital, Columbus, Ohio 43205 and the Department of Pediatrics, Molecular, Cellular and Developmental Biology Program, and.
Dawn S ChandlerFrom the Center for Childhood Cancer, Research Institute at Nationwide Children's Hospital, Columbus, Ohio 43205 and the Department of Pediatrics, Molecular, Cellular and Developmental Biology Program, and Center for RNA Biology, Wexner Medical Center, The Ohio State University, Columbus, Ohio 43210 Dawn.Chandler@nationwidechildrens.org.
Nationwide Children's Hospital · USThe Ohio State University Wexner Medical Center · US

Funding

Coordinately regulated alternative splicing in DNA damage and cancerR01CA133571 · NCI · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI CHANDLER, DAWN S · 2010 to 2014
$1.3M
NCI NIH HHS 1R01CA133571NCI NIH HHS R01 CA133571
6 · The paper itself

Abstract

Alternative splicing of the oncogene MDM2 is a phenomenon that occurs in cells in response to genotoxic stress and is also a hallmark of several cancer types with important implications in carcinogenesis. However, the mechanisms regulating this splicing event remain unclear. Previously, we uncovered the importance of intron 11 in MDM2 that affects the splicing of a damage-responsive MDM2 minigene. Here, we have identified discrete cis regulatory elements within intron 11 and report the binding of FUBP1 (Far Upstream element-Binding Protein 1) to these elements and the role it plays in MDM2 splicing. Best known for its oncogenic role as a transcription factor in the context of c-MYC, FUBP1 was recently described as a splicing regulator with splicing repressive functions. In the case of MDM2, we describe FUBP1 as a positive splicing regulatory factor. We observed that blocking the function of FUBP1 in in vitro splicing reactions caused a decrease in splicing efficiency of the introns of the MDM2 minigene. Moreover, knockdown of FUBP1 in cells induced the formation of MDM2-ALT1, a stress-induced splice variant of MDM2, even under normal conditions. These results indicate that FUBP1 is also a strong positive splicing regulator that facilitates efficient splicing of the MDM2 pre-mRNA by binding its introns. These findings are the first report describing the regulation of alternative splicing of MDM2 mediated by the oncogenic factor FUBP1.

Indexed as

Alternative SplicingDNA-Binding ProteinsDNA HelicasesHeLa CellsHumansIntronsNuclear ProteinsProto-Oncogene Proteins c-mycRNA-Binding ProteinsRNA PrecursorsTrans-ActivatorsTranscription FactorsDNA-Binding ProteinsDNA HelicasesFUBP1 protein, humanMAML2 protein, humanMYC protein, humanNuclear ProteinsProto-Oncogene Proteins c-mycRNA-Binding ProteinsRNA PrecursorsTrans-ActivatorsTranscription FactorsCancerMDM2Oncogenep53RNARNA-binding ProteinRNA-Protein InteractionRNA Splicing

Identifiers

PMID24798327
PMCPMC4067169
OpenAlexW2087819495

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.