Evidence map›Paper›PMID 24797902›Full record

ArticlePloS one2014

Structural and functional similarity of amphibian constitutive androstane receptor with mammalian pregnane X receptor.

Marianne Mathäs, Christian Nusshag, Christian Nuβhag, Oliver Burk, Ute Gödtel-Armbrust, Holger Herlyn, Leszek Wojnowski, Björn Windshügel

Erratum issuedOpen access · goldAbstract readComparative Study
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Marianne MathäsDepartment of Pharmacology, University Medical Center, Mainz, Germany.
Christian Nusshag
Christian NuβhagDepartment of Pharmacology, University Medical Center, Mainz, Germany.
Oliver BurkDr. Margarete Fischer-Bosch-Institute of Clinical Pharmacology, Stuttgart, Germany.
Ute Gödtel-ArmbrustDepartment of Pharmacology, University Medical Center, Mainz, Germany.
Holger HerlynInstitute of Anthropology, Johannes Gutenberg-University, Mainz, Germany.
Leszek WojnowskiDepartment of Pharmacology, University Medical Center, Mainz, Germany.
Björn WindshügelCentre for Bioinformatics, University of Hamburg, Hamburg, Germany; European ScreeningPort GmbH, Hamburg, Germany.
Johannes Gutenberg University Mainz · DEUniversität Hamburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nuclear receptors and xenosensors constitutive androstane receptor (CAR, NR1I3) and pregnane X receptor (PXR, NR1I2) induce the expression of xenobiotic metabolizing enzymes and transporters, which also affects various endobiotics. While human and mouse CAR feature a high basal activity and low induction upon ligand exposure, we recently identified two constitutive androstane receptors in Xenopus laevis (xlCARá and â) that possess PXR-like characteristics such as low basal activity and activation in response to structurally diverse compounds. Using a set of complementary computational and biochemical approaches we provide evidence for xlCARá being the structural and functional counterpart of mammalian PXR. A three-dimensional model of the xlCARá ligand-binding domain (LBD) reveals a human PXR-like L-shaped ligand binding pocket with a larger volume than the binding pockets in human and murine CAR. The shape and amino acid composition of the ligand-binding pocket of xlCAR suggests PXR-like binding of chemically diverse ligands which was confirmed by biochemical methods. Similarly to PXR, xlCARá possesses a flexible helix 11'. Modest increase in the recruitment of coactivator PGC-1á may contribute to the enhanced basal activity of three gain-of-function xlCARá mutants humanizing key LBD amino acid residues. xlCARá and PXR appear to constitute an example of convergent evolution.

Indexed as

Amphibian ProteinsAnimalsBinding SitesCell LineChlorocebus aethiopsConstitutive Androstane ReceptorCOS CellsCrystallography, X-RayHumansModels, MolecularMolecular Dynamics SimulationPregnane X ReceptorReceptors, Cytoplasmic and NuclearReceptors, SteroidXenopus laevisAmphibian ProteinsConstitutive Androstane ReceptorNR1I2 protein, humanNr1i2 protein, mouseNR1I3 protein, humanNr1i3 protein, mousePregnane X ReceptorReceptors, Cytoplasmic and NuclearReceptors, Steroid

Identifiers

PMID24797902
PMCPMC4010427
OpenAlexW4239649221

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.