Evidence map›Paper›PMID 24797296›Full record

ArticlePloS one2014

Amino acids regulate transgene expression in MDCK cells.

Marta Torrente, Adriano Guetg, Jörn Oliver Sass, Lisa Arps, Lisa Ruckstuhl, Simone M R Camargo, François Verrey

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Marta TorrenteInstitute of Physiology and Zurich Center of Integrative Human Physiology, University of Zurich, Zurich, Switzerland.
Adriano GuetgInstitute of Physiology and Zurich Center of Integrative Human Physiology, University of Zurich, Zurich, Switzerland.
Jörn Oliver SassDivision of Clinical Chemistry & Biochemistry, University Children's Hospital, Zurich, Zurich, Switzerland.
Lisa ArpsInstitute of Physiology and Zurich Center of Integrative Human Physiology, University of Zurich, Zurich, Switzerland.
Lisa RuckstuhlInstitute of Physiology and Zurich Center of Integrative Human Physiology, University of Zurich, Zurich, Switzerland.
Simone M R CamargoInstitute of Physiology and Zurich Center of Integrative Human Physiology, University of Zurich, Zurich, Switzerland.
François VerreyInstitute of Physiology and Zurich Center of Integrative Human Physiology, University of Zurich, Zurich, Switzerland.
University of Zurich · CHSwiss Integrative Center for Human Health · CHBoston Children's Hospital · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gene expression and cell growth rely on the intracellular concentration of amino acids, which in metazoans depends on extracellular amino acid availability and transmembrane transport. To investigate the impact of extracellular amino acid concentrations on the expression of a concentrative amino acid transporter, we overexpressed the main kidney proximal tubule luminal neutral amino acid transporter B0AT1-collectrin (SLC6A19-TMEM27) in MDCK cell epithelia. Exogenously expressed proteins co-localized at the luminal membrane and mediated neutral amino acid uptake. However, the transgenes were lost over few cell culture passages. In contrast, the expression of a control transgene remained stable. To test whether this loss was due to inappropriately high amino acid uptake, freshly transduced MDCK cell lines were cultivated either with physiological amounts of amino acids or with the high concentration found in standard cell culture media. Expression of exogenous transporters was unaffected by physiological amino acid concentration in the media. Interestingly, mycoplasma infection resulted in a significant increase in transgene expression and correlated with the rapid metabolism of L-arginine. However, L-arginine metabolites were shown to play no role in transgene expression. In contrast, activation of the GCN2 pathway revealed by an increase in eIF2α phosphorylation may trigger transgene derepression. Taken together, high extracellular amino acid concentration provided by cell culture media appears to inhibit the constitutive expression of concentrative amino acid transporters whereas L-arginine depletion by mycoplasma induces the expression of transgenes possibly via stimulation of the GCN2 pathway.

Indexed as

Gene Expression RegulationTransgenesAmino AcidsAmino Acid Transport Systems, NeutralAnimalsArginineCulture MediaDogsEpithelial CellsGenetic TechniquesHEK293 CellsHumansKidneyMadin Darby Canine Kidney CellsMembrane GlycoproteinsMycoplasmaAmino AcidsAmino Acid Transport Systems, NeutralArginineCLTRN protein, humanCulture MediaMembrane GlycoproteinsSLC6A19 protein, human

Identifiers

PMID24797296
PMCPMC4010483
OpenAlexW2067130453

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.