Evidence map›Paper›PMID 24796370›Full record

ArticlePediatric research2014

Rare GATA5 sequence variants identified in individuals with bicuspid aortic valve.

Elizabeth M Bonachea, Sheng-Wei Chang, Gloria Zender, Stephanie LaHaye, Sara Fitzgerald-Butt, Kim L McBride, Vidu Garg

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in Pediatric research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT01192048 (Genetic Testing of Individuals and Families With Congenital Heart Disease), which is not on this map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01192048 recruitingnot on this map

Genetic Testing of Individuals and Families With Congenital Heart Disease

TypeobservationalSponsorNationwide Children's HospitalRan2009 to 2030Enrolled5,000ConditionsCongenital Heart DiseaseArmsBlood Sample Collection
3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 87 citations in OpenAlex.

  1. Genetics of Congenital Heart Disease.Clinics in perinatology · 2025
    Review
  2. Bicuspid Aortic Valve and Sudden Cardiac Death.Life (Basel, Switzerland) · 2025
    Review
  3. Chromosomal Location and Identification ofDiagnostics (Basel, Switzerland) · 2025
    Article
  4. Article
  5. Article
  6. In-Depth Genomic Analysis: The New Challenge in Congenital Heart Disease.International journal of molecular sciences · 2024
    Review
  7. Article
  8. Human Genetics of Semilunar Valve and Aortic Arch Anomalies.Advances in experimental medicine and biology · 2024
    Review
  9. Article
  10. Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Genomic frontiers in congenital heart disease.Nature reviews. Cardiology · 2022
    Review
  17. Review
  18. Article
  19. Review
  20. In Vivo and In Vitro Genetic Models of Congenital Heart Disease.Cold Spring Harbor perspectives in biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Elizabeth M BonacheaDepartment of Pediatrics, The Ohio State University, Columbus, Ohio.
Sheng-Wei Chang1] Center for Cardiovascular and Pulmonary Research, Nationwide Children's Hospital, Columbus, Ohio [2] The Heart Center, Nationwide Children's Hospital, Columbus, Ohio.
Gloria Zender1] Center for Cardiovascular and Pulmonary Research, Nationwide Children's Hospital, Columbus, Ohio [2] The Heart Center, Nationwide Children's Hospital, Columbus, Ohio.
Stephanie LaHaye1] Center for Cardiovascular and Pulmonary Research, Nationwide Children's Hospital, Columbus, Ohio [2] The Heart Center, Nationwide Children's Hospital, Columbus, Ohio [3] Department of Molecular Genetics, The Ohio State University, Columbus, Ohio.
Sara Fitzgerald-Butt1] Department of Pediatrics, The Ohio State University, Columbus, Ohio [2] Center for Cardiovascular and Pulmonary Research, Nationwide Children's Hospital, Columbus, Ohio [3] The Heart Center, Nationwide Children's Hospital, Columbus, Ohio.
Kim L McBride1] Department of Pediatrics, The Ohio State University, Columbus, Ohio [2] Center for Cardiovascular and Pulmonary Research, Nationwide Children's Hospital, Columbus, Ohio [3] The Heart Center, Nationwide Children's Hospital, Columbus, Ohio.
Vidu Garg1] Department of Pediatrics, The Ohio State University, Columbus, Ohio [2] Center for Cardiovascular and Pulmonary Research, Nationwide Children's Hospital, Columbus, Ohio [3] The Heart Center, Nationwide Children's Hospital, Columbus, Ohio [4] Department of Molecular Genetics, The Ohio State University, Columbus, Ohio.
The Ohio State University · USNationwide Children's Hospital · US

Funding

Comprehensive Sequencing and Analysis of Variation in NHLBI CohortsUC2HL102925 · NHLBI · BROAD INSTITUTE, INC. · PI ALTSHULER, DAVID, GABRIEL, STACEY · 2010 to 2010
$14.7M
Northwest Genomics CenterUC2HL102926 · NHLBI · UNIVERSITY OF WASHINGTON · PI GREEN, PHILIP P, NICKERSON, DEBORAH A · 2010 to 2010
$14.0M
Northwest Genomics CenterRC2HL102926 · NHLBI · UNIVERSITY OF WASHINGTON · PI GREEN, PHILIP P, NICKERSON, DEBORAH A · 2009 to 2009
$11.0M
Comprehensive Sequencing and Analysis of Variation in NHLBI CohortsRC2HL102925 · NHLBI · BROAD INSTITUTE, INC. · PI ALTSHULER, DAVID, GABRIEL, STACEY · 2009 to 2009
$10.2M
Genome Wide Association Study for Hypoplastic Left Heart and Related DefectsR01HL090506 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI BELMONT, JOHN WILLIAM · 2008 to 2011
$3.0M
Exome sequencing and functional studies in familial CHDR01HL109758 · NHLBI · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI GARG, VIDU, MCBRIDE, KIM LEWIS · 2012 to 2015
$2.7M
ARRA - NHLBI Lung Cohorts Sequencing ProjectRC2HL102923 · NHLBI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, BARNES, KATHLEEN C · 2009 to 2009
$2.6M
ARRA - NHLBI Lung Cohorts Sequencing ProjectUC2HL102923 · NHLBI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, BARNES, KATHLEEN C · 2010 to 2010
$2.6M
WHI Sequencing Project (WHISP)UC2HL102924 · NHLBI · OHIO STATE UNIVERSITY · PI CARLSON, CHRISTOPHER S, JACKSON, REBECCA D · 2010 to 2010
$2.4M
WHI Sequencing Project (WHISP)RC2HL102924 · NHLBI · OHIO STATE UNIVERSITY · PI CARLSON, CHRISTOPHER S, JACKSON, REBECCA D · 2009 to 2009
$2.1M
Genetic Regulation of Cardiac SeptationR01HL088965 · NHLBI · UT SOUTHWESTERN MEDICAL CENTER · PI GARG, VIDU · 2007 to 2011
$1.9M
Human Exome Sequencing in Six Well-Phenotyped NHLBI CohortsUC2HL103010 · NHLBI · UNIVERSITY OF VIRGINIA · PI RICH, STEPHEN S. · 2010 to 2010
$1.5M
NHLBI NIH HHS HL-102923NHLBI NIH HHS HL-102924NHLBI NIH HHS HL-102925NHLBI NIH HHS HL-102926NHLBI NIH HHS HL-103010NHLBI NIH HHS R01 HL088965NHLBI NIH HHS R01HL088965NHLBI NIH HHS R01HL090506NHLBI NIH HHS R01 HL109758NHLBI NIH HHS R01HL109758NHLBI NIH HHS R21HL106549NHLBI NIH HHS RC2 HL102923NHLBI NIH HHS RC2 HL102924NHLBI NIH HHS RC2 HL102925NHLBI NIH HHS RC2 HL102926NHLBI NIH HHS RC2 HL103010NHLBI NIH HHS UC2 HL102923NHLBI NIH HHS UC2 HL102924NHLBI NIH HHS UC2 HL102925NHLBI NIH HHS UC2 HL102926NHLBI NIH HHS UC2 HL103010
6 · The paper itself

Abstract

backgroundBicuspid aortic valve (BAV) is the most common type of congenital heart disease (CHD) and has a proposed genetic etiology. BAV is categorized by cusp fusion, with right-left (R-L) cusp fusion being associated with additional CHD, and right-noncoronary cusp (R-NC) fusion being associated with aortic valve dysfunction. Loss of murine Gata5, which encodes a cardiac transcription factor, results in a partially penetrant R-NC BAV, and we hypothesize that mutations in GATA5 are associated with R-NC BAV in humans.

methodsA cohort of 78 BAV patients (50 with isolated BAV and 28 with associated aortic coarctation) was analyzed using Sanger sequencing to identify GATA5 sequence variants. Biochemical assays were performed to identify functional deficits of identified sequence variants.

resultsWe identified two rare heterozygous nonsynonymous variants, p.Gln3Arg and p.Leu233Pro, for a frequency of 2.6% (2/78). Both individuals with nonsynonymous variants had BAV and aortic coarctation, one R-L and one R-NC subtype. Of the nonsynonymous variants, only p.Gln3Arg demonstrated decreased transcriptional activity in vitro.

conclusionRare sequence variants in GATA5 are associated with human BAV. Our findings suggest a genotype-phenotype correlation in regards to associated CHD but not cusp fusion.

Indexed as

Genetic VariationPhenotypeAortic ValveBase SequenceBicuspid Aortic Valve DiseaseCohort StudiesDNA PrimersFemaleGATA5 Transcription FactorHeart Valve DiseasesHumansImmunoblottingMaleMolecular Sequence DataMutation, MissenseOhioDNA PrimersGATA5 protein, humanGATA5 Transcription Factor

Identifiers

PMID24796370
PMCPMC5717758
OpenAlexW2022582199

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.