Evidence map›Paper›PMID 24792668›Full record

ArticleJournal of proteome research2014

High-confidence glycosome proteome for procyclic form Trypanosoma brucei by epitope-tag organelle enrichment and SILAC proteomics.

Maria Lucia S Güther, Michael D Urbaniak, Amy Tavendale, Alan Prescott, Michael A J Ferguson

Open access · hybridAbstract read
In one paragraph

Article in Journal of proteome research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 99 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. PEX1 is essential for glycosome biogenesis and trypanosomatid parasite survival.Frontiers in cellular and infection microbiology · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Frontiers in molecular biosciences · 2022
    Article
  15. Article
  16. Glycosome heterogeneity in kinetoplastids.Biochemical Society transactions · 2021
    Review
  17. Article
  18. Subcellular proteomics.Nature reviews. Methods primers · 2021
    Article
  19. Article
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Maria Lucia S GütherDivision of Biological Chemistry and Drug Discovery and ‡Centre for Advanced Scientific Technologies, College of Life Sciences, University of Dundee , Dow Street, Dundee DD1 5EH, United Kingdom.
Michael D Urbaniak
Amy Tavendale
Alan Prescott
Michael A J Ferguson
University of Dundee · GB

Funding

Wellcome Trust 085622Wellcome Trust 097945Wellcome Trust 100476Wellcome Trust 101842
6 · The paper itself

Abstract

The glycosome of the pathogenic African trypanosome Trypanosoma brucei is a specialized peroxisome that contains most of the enzymes of glycolysis and several other metabolic and catabolic pathways. The contents and transporters of this membrane-bounded organelle are of considerable interest as potential drug targets. Here we use epitope tagging, magnetic bead enrichment, and SILAC quantitative proteomics to determine a high-confidence glycosome proteome for the procyclic life cycle stage of the parasite using isotope ratios to discriminate glycosomal from mitochondrial and other contaminating proteins. The data confirm the presence of several previously demonstrated and suggested pathways in the organelle and identify previously unanticipated activities, such as protein phosphatases. The implications of the findings are discussed.

Indexed as

Endoplasmic ReticulumEpitopesIsotope LabelingLife Cycle StagesMicrobodiesMitochondriaMitochondrial ProteinsProteomeProteomicsProtozoan ProteinsTrypanosoma brucei bruceiEpitopesMitochondrial ProteinsProteomeProtozoan Proteins

Identifiers

PMID24792668
PMCPMC4052807
OpenAlexW2073862341

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.