Evidence map›Paper›PMID 24791950›Full record

ArticleBehavior genetics2014

The contribution of the functional IL6R polymorphism rs2228145, eQTLs and other genome-wide SNPs to the heritability of plasma sIL-6R levels.

Jenny van Dongen, Rick Jansen, Dirk Smit, Jouke-Jan Hottenga, Hamdi Mbarek, Gonneke Willemsen, Cornelis Kluft, AAGC Collaborators, Brenda W J Penninx, Manuel A Ferreira and 2 more

Open access · greenAbstract readTwin Study
In one paragraph

Article in Behavior genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.

  1. Pooled it
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  6. Review
  7. Article
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  14. IL6 receptorNeurology(R) neuroimmunology & neuroinflammation · 2019
    Article
  15. Review
  16. Article
  17. Heliyon · 2019
    Article
  18. IL-6: a cytokine at the crossroads of autoimmunity.Current opinion in immunology · 2018
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Jenny van DongenDepartment of Biological Psychology, VU University Amsterdam, Van der Boechorststraat 1, 1081 BT, Amsterdam, The Netherlands, j.van.dongen@vu.nl.
Rick Jansen
Dirk Smit
Jouke-Jan Hottenga
Hamdi Mbarek
Gonneke Willemsen
Cornelis Kluft
AAGC Collaborators
Brenda W J Penninx
Manuel A Ferreira
Dorret I Boomsma
Eco J C de Geus
Amsterdam Neuroscience · NLAmsterdam Public Health · NLGBS Leiden · NLQIMR Berghofer Medical Research Institute · AUVrije Universiteit Amsterdam · NL

Funding

Integration of Genomics & Transcriptomics in Normal Twins & Major DepressionRC2MH089951 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SULLIVAN, PATRICK F · 2009 to 2010
$6.5M
Genomics of Developmental Trajectories in TwinsRC2MH089995 · NIMH · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI HUDZIAK, JAMES J. · 2009 to 2010
$3.8M
NIMH NIH HHS 1RC2 MH089951-01NIMH NIH HHS 1RC2MH089995-01NIMH NIH HHS RC2 MH089951NIMH NIH HHS RC2 MH089995
6 · The paper itself

Abstract

The non-synonymous SNP rs2228145 in the IL6R gene on chromosome 1q21.3 is associated with a wide range of common diseases, including asthma, rheumatoid arthritis, type 1 diabetes and coronary heart disease. We examined the contribution of this functional IL6R gene polymorphism rs2228145 versus other genome-wide SNPs to the variance of sIL-6R levels in blood plasma in a large population-based sample (N ~5,000), and conducted an expression QTL analysis to identify SNPs associated with IL6R gene expression. Based on data from 2,360 twin families, the broad heritability of sIL-6R was estimated at 72 and 51% of the total variance was explained by the functional SNP rs2228145. Converging findings from GWAS, linkage, and GCTA analyses indicate that additional variance of sIL-6R levels can be explained by other variants in the IL6R region, including variants at the 3'-end of IL6R tagged by rs60760897 that are associated with IL6R RNA expression.

Indexed as

Polymorphism, Single NucleotideEnzyme-Linked Immunosorbent AssayFemaleGenome-Wide Association StudyGenotypeHumansMaleNetherlandsOligonucleotide Array Sequence AnalysisQuantitative Trait LociReceptors, Interleukin-6Receptors, Interleukin-6

Identifiers

PMID24791950
PMCPMC4283105
OpenAlexW2043070494

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.